EST details — SGN-E548487
| Search information |
| Request: 548487 | Match: SGN-E548487 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190919 | Clone name: TUS-61-K13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81674 [cLET-17-K11] | Trace: SGN-T106789 | EST: SGN-E294734 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C81674 [cLET-17-K11] | Trace: SGN-T106790 | EST: SGN-E294735 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E548487 | Length: 751 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548487 [] (trimmed)
GGAGAAAAGAAACAATAATTAGTACATATCATAAATGGACATTTGAGGACCTGCTGTTTTCGATAAATGTACAGGATACAGAAAAAGAAATAAAC
ATTTTCCTCTTTGAGTGTTTCAAAAAAATAAAACAAAATCAATCTGTGTGTATATTTTACCTTTTCAAAAGTACATCTGAAGTAAATGTATATAG
GATATGAACCAGAACAAAACTGGGAAAATGGATTCTAATGGAAGTATAGGATATGTCTTCAAGTCACAAATTATCTTCATTTTCAATCATATCGC
GTACCTCACTAACGACTACATATGCTTTGTGGCCGCCAATTACTTCCGCTTGTTTCTTCCCATCCCTCCATAACTGTATGGTCGGCATTTTAGTT
ACTCCAGCGCGAACCACAAGCTTGTGTGGAACATTATTGACATCAACAGAGTAAAAGCGTGTTCTTGGGAAGTAGTCAGCAGCCAGTTTTTCCAA
TTTTGGTTTCAAGTATATGCATTTGCGGCACCAGTTTGCCATCCATAGAATCACAATAGATTCATCAAGCTGTTGTGCTTCAGCTATAACTCGAT
CAAATTGGGGTTCATCAGAAATGTGTTGTAGCTCAATCGAAGCAGGTGAATCATCAAGATCTTGTACAGAACTTTCTCCATCATGATTTTCCAAA
ACCTGAACTCTCACCTTAAAATCCAAGTGAATTCTTGAACAATTTANGGAAATTGGTACTAAAAGTACCAATTTTGAAGCTTTAAA
ATTTTCCTCTTTGAGTGTTTCAAAAAAATAAAACAAAATCAATCTGTGTGTATATTTTACCTTTTCAAAAGTACATCTGAAGTAAATGTATATAG
GATATGAACCAGAACAAAACTGGGAAAATGGATTCTAATGGAAGTATAGGATATGTCTTCAAGTCACAAATTATCTTCATTTTCAATCATATCGC
GTACCTCACTAACGACTACATATGCTTTGTGGCCGCCAATTACTTCCGCTTGTTTCTTCCCATCCCTCCATAACTGTATGGTCGGCATTTTAGTT
ACTCCAGCGCGAACCACAAGCTTGTGTGGAACATTATTGACATCAACAGAGTAAAAGCGTGTTCTTGGGAAGTAGTCAGCAGCCAGTTTTTCCAA
TTTTGGTTTCAAGTATATGCATTTGCGGCACCAGTTTGCCATCCATAGAATCACAATAGATTCATCAAGCTGTTGTGCTTCAGCTATAACTCGAT
CAAATTGGGGTTCATCAGAAATGTGTTGTAGCTCAATCGAAGCAGGTGAATCATCAAGATCTTGTACAGAACTTTCTCCATCATGATTTTCCAAA
ACCTGAACTCTCACCTTAAAATCCAAGTGAATTCTTGAACAATTTANGGAAATTGGTACTAAAAGTACCAATTTTGAAGCTTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548487] | SGN-U587128 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349362 [Download][View] | Facility Assigned ID: TUS61K13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 20.5 |
Working
