EST details — SGN-E547638
| Search information |
| Request: 547638 | Match: SGN-E547638 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194746 | Clone name: TUS-71-J24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C105032 [cLPP-16-N19] | Trace: SGN-T176565 | EST: SGN-E364183 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194746 [TUS-71-J24] | Trace: SGN-T348514 | EST: SGN-E547639 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547638 | Length: 554 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547638 [] (trimmed)
GCAAAAGGGGTTTGACTTGACCCCCATCGATTTATTGGTACCAAAAGAAGTACCACCTATATGTAAATTAAAAAGTTCCCTAAAAATTAAGGAAT
GACATTTCATTCCTTTTCCAAATAAGAAGAAGACCCCTGAAAAACTGAGAAATTTTTCCGCCAAAAAATAAATAAAATTCCAAATTTTTTAAGCG
TTTTAAAAAAGCCCCCCCACATAATACTTCCAAAATTTAAAGGGTCCCAGGAGGAAGTAGCCCCTTAGGGCCTTCAATATAAGCCAGGGAAAAAA
AAGGGTTTGCCCCTTCATCAGGTAATTTCTTTGGAAAAGGAACTCTTTTATCCAAAGTTGCCCCCGCCCCTTTGCACTTGGATTCTCCAAAAAAA
ACCGGGCTGCCAAAATCTTTTTTGCCAAAAACAGACCATCCTTCAGGGGGAATAACATCCGTCCTATCCGTATATGAGAAAACAACTTTAGAGGA
TTGGTTCCATGCCCCTCCTAGATATGGTGGATTTCCCGTACCAGTAATCATACAATGGACAAAAGAAAATCCCCTATCA
GACATTTCATTCCTTTTCCAAATAAGAAGAAGACCCCTGAAAAACTGAGAAATTTTTCCGCCAAAAAATAAATAAAATTCCAAATTTTTTAAGCG
TTTTAAAAAAGCCCCCCCACATAATACTTCCAAAATTTAAAGGGTCCCAGGAGGAAGTAGCCCCTTAGGGCCTTCAATATAAGCCAGGGAAAAAA
AAGGGTTTGCCCCTTCATCAGGTAATTTCTTTGGAAAAGGAACTCTTTTATCCAAAGTTGCCCCCGCCCCTTTGCACTTGGATTCTCCAAAAAAA
ACCGGGCTGCCAAAATCTTTTTTGCCAAAAACAGACCATCCTTCAGGGGGAATAACATCCGTCCTATCCGTATATGAGAAAACAACTTTAGAGGA
TTGGTTCCATGCCCCTCCTAGATATGGTGGATTTCCCGTACCAGTAATCATACAATGGACAAAAGAAAATCCCCTATCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547638] | SGN-U594416 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348513 [Download][View] | Facility Assigned ID: TUS71J24_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.906 | Expected Error Rate: 0.0239 | Quality Trim Threshold: 14.5 |
Working
