EST details — SGN-E547616
| Search information |
| Request: 547616 | Match: SGN-E547616 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194733 | Clone name: TUS-71-J11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104939 [cLPP-16-I4] | Trace: SGN-T176367 | EST: SGN-E363985 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194733 [TUS-71-J11] | Trace: SGN-T350440 | EST: SGN-E549565 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547616 | Length: 740 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547616 [] (trimmed)
CACATCAAACTTATTATTATTATTATTTCAAAATACATAACAAAACAACATTATAGTATTTTTAAAATTATTATGGTACTACTAATCCACTACTA
ATTTATATAATAGTAGTAGCAGTAGCTAGAAAGCCACTGAATATACTCAAGTTAGCTTTCATCAAACCTAATTACACATATATTAGTACTAGTTA
ATTAATACATAATGAAAACATAGGATTAACATCCACTAATTAATCTCCATGTTTCTGTAGCATAGCAACTCATACATTAAAAGAAAAATACTTTA
TTTACATATAACATTATTCAGATATCGCTCTGTCACGATCCAAAATCTTTTAGCCTTTCATTTCACTGATGCTTGGATCGGGTATCCCCACTGTA
GAGCCAATCATAAACAGTGGGTGCATTGGGGTGAGAAGGTTTGTCAAAGACTTCAGCACCAATTCTCTTGGTTGCACTGTTGCTCCCTGGATTGA
ACACGCTCCTCCACACATTATCTTTACGCGCCGTTGGCGAGTAAGTGTTTGGGGTCCCCGGGCTTCCCGGTGTCCTTGGGCTCGATAAACTTGAG
CCCGAGCCCGGCATAGATAAAGACCTTTGGTAACTCTTACTTGCTCCTTCTCCTCCTTCTCCACCAGAAGTGTTGACAGATAGGCCCTTTAGAAA
TCTACTATTAGTAGGACGGGGTCCAGCCATAACATCATCCCAACCATCTAGAACCATCTTTTTTAACTCTGAATT
ATTTATATAATAGTAGTAGCAGTAGCTAGAAAGCCACTGAATATACTCAAGTTAGCTTTCATCAAACCTAATTACACATATATTAGTACTAGTTA
ATTAATACATAATGAAAACATAGGATTAACATCCACTAATTAATCTCCATGTTTCTGTAGCATAGCAACTCATACATTAAAAGAAAAATACTTTA
TTTACATATAACATTATTCAGATATCGCTCTGTCACGATCCAAAATCTTTTAGCCTTTCATTTCACTGATGCTTGGATCGGGTATCCCCACTGTA
GAGCCAATCATAAACAGTGGGTGCATTGGGGTGAGAAGGTTTGTCAAAGACTTCAGCACCAATTCTCTTGGTTGCACTGTTGCTCCCTGGATTGA
ACACGCTCCTCCACACATTATCTTTACGCGCCGTTGGCGAGTAAGTGTTTGGGGTCCCCGGGCTTCCCGGTGTCCTTGGGCTCGATAAACTTGAG
CCCGAGCCCGGCATAGATAAAGACCTTTGGTAACTCTTACTTGCTCCTTCTCCTCCTTCTCCACCAGAAGTGTTGACAGATAGGCCCTTTAGAAA
TCTACTATTAGTAGGACGGGGTCCAGCCATAACATCATCCCAACCATCTAGAACCATCTTTTTTAACTCTGAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547616] | SGN-U585574 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348491 [Download][View] | Facility Assigned ID: TUS71J11_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 12.5 |
Working
