EST details — SGN-E547394
| Search information |
| Request: 547394 | Match: SGN-E547394 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194604 | Clone name: TUS-71-E2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C103920 [cLPP-12-F8] | Trace: SGN-T175068 | EST: SGN-E361869 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194604 [TUS-71-E2] | Trace: SGN-T348270 | EST: SGN-E547395 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547394 | Length: 758 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547394 [] (trimmed)
GCTGTTGTTTCTGGACTTCCTTTTCTCATCATAGCTGCAAATTCATCATAATTAATTCGACCATCATTATTTGAGTCAACTTCAGCAACAATATC
TTGTATGTCCTTTCCATCATCAATACCAAATTCTCTTAAAGCTTGCTCTAACTCTTCTATTGTGATGTACCCACTATTATCCTTGTCAAAATATT
GGAATGCTGTGTAAAGATGTTCTTCTTTGTCCATTCTGTTCATGTGCATTGTTGCTGTAATAAATTCTTCATAATCTATGGTTCCATTTCCATCA
GCATCAGCAGCTTCCATTAATTGTTGAATTTCATAATCAGATAATTTAGTTCCTTGTTTGGCAAGTCCTTGTTTTAGCTCCTCAAGTGTTATTGC
TCCACTATTATCAGCATCCATACTTTTGAACATTTGCTTTAATCCCATTATTTCTTCCTCTGATAAACATCCTGCAATAACCCGGAGAGCAACTT
TCTTGAAATTGTTCATGGCTCTAAATTGTTTGAGTCTACTTAAAACAGCATTGTCAAGTGGTGTATCTGGTGCATCTCCATCCTCCTTGATCCAT
GGATGATTTAACACTTGAATTGCTGTTAACCTCTGCTTGGGATCTGAAGTCAACATCTTCCTAACAATATCTTTGGCACCATGTGAAATTGAAGG
CCATGGATCACTTGAAAAATCAATATGTCCACGCAATATTGCATTGAATATTCCATGTTCAGTTTCTGCCCAAAAGGAGGAACCCCTGAAAGA
TTGTATGTCCTTTCCATCATCAATACCAAATTCTCTTAAAGCTTGCTCTAACTCTTCTATTGTGATGTACCCACTATTATCCTTGTCAAAATATT
GGAATGCTGTGTAAAGATGTTCTTCTTTGTCCATTCTGTTCATGTGCATTGTTGCTGTAATAAATTCTTCATAATCTATGGTTCCATTTCCATCA
GCATCAGCAGCTTCCATTAATTGTTGAATTTCATAATCAGATAATTTAGTTCCTTGTTTGGCAAGTCCTTGTTTTAGCTCCTCAAGTGTTATTGC
TCCACTATTATCAGCATCCATACTTTTGAACATTTGCTTTAATCCCATTATTTCTTCCTCTGATAAACATCCTGCAATAACCCGGAGAGCAACTT
TCTTGAAATTGTTCATGGCTCTAAATTGTTTGAGTCTACTTAAAACAGCATTGTCAAGTGGTGTATCTGGTGCATCTCCATCCTCCTTGATCCAT
GGATGATTTAACACTTGAATTGCTGTTAACCTCTGCTTGGGATCTGAAGTCAACATCTTCCTAACAATATCTTTGGCACCATGTGAAATTGAAGG
CCATGGATCACTTGAAAAATCAATATGTCCACGCAATATTGCATTGAATATTCCATGTTCAGTTTCTGCCCAAAAGGAGGAACCCCTGAAAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547394] | SGN-U602955 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348269 [Download][View] | Facility Assigned ID: TUS71E02_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.937 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 20.5 |
Working
