EST details — SGN-E546901
| Search information |
| Request: 546901 | Match: SGN-E546901 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194317 | Clone name: TUS-70-I3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C107063 [cLPP-4-C5] | Trace: SGN-T175688 | EST: SGN-E363251 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194317 [TUS-70-I3] | Trace: SGN-T347777 | EST: SGN-E546902 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546901 | Length: 832 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546901 [] (trimmed)
AAAAGCCAAGTAACCCNCTTCAACAATTCAACAAAAACAAATTTCAAGATTAGAGGTTTGGGAAATGAATAATACTAATTTGGATGCACCAAAAA
AAACAAAAAATCTTGTATAGCCACTTACACAAATGCTACAACTATACACAACTTTAATACCCAAAATTGAAAATTGGGGCAACATTACCAAAATT
ACAGGCCAATTAAGGCAACACAGCTGAAATAATCAGCATATTTTTGCACAAGAGATGCTATTATGATCTGACATCCTTCAGCACTCCGCCTTTCT
CAAGTTCATCGACAAGGTCTTTCAATGCTGGAACCTTTCCGGCAAGAGTCCTGTAGAGTCTGGAATACCGAGCTCTGGTTCCATCTGCTGTCTTT
GCAAAAGCAAGAAGGCTTAACGACTGCGGGAGCTGTGTGAATAACTGTTTCATCTCATCCAAGCTCAAATTTTCAAGAACAGGTGGTCTGGGAAC
AACTCGGACAATCTCACCCCCTTTAGGTTCTTCAACTTGTGCATCTGCTTTAACGACCAGTTCAGAGTTTGAGTTAGCTCCACATTTGACGATAA
ATGGGCTTGTGGAACCTGTGTTGAACTGAAGAACATTCCACTGTGTCACGTCAGTTTCTCCCCCTAATCCCACATTTGCAGGAGGCCGAGAAGCA
TGTATATTTTCATGAAGCCGGTCATCCTCTTCACGAATTAACTCAACAGCATGCCGTGCTTCATCAATGTGCCTCTGAGCACACGGATGATCAAT
GTCAAGCAAGGAAGGCATTCGCTCTGCTAGTTCATTTAGAGAAGCTAGCAAAGCTTTCTTCTACTCTTACTG
AAACAAAAAATCTTGTATAGCCACTTACACAAATGCTACAACTATACACAACTTTAATACCCAAAATTGAAAATTGGGGCAACATTACCAAAATT
ACAGGCCAATTAAGGCAACACAGCTGAAATAATCAGCATATTTTTGCACAAGAGATGCTATTATGATCTGACATCCTTCAGCACTCCGCCTTTCT
CAAGTTCATCGACAAGGTCTTTCAATGCTGGAACCTTTCCGGCAAGAGTCCTGTAGAGTCTGGAATACCGAGCTCTGGTTCCATCTGCTGTCTTT
GCAAAAGCAAGAAGGCTTAACGACTGCGGGAGCTGTGTGAATAACTGTTTCATCTCATCCAAGCTCAAATTTTCAAGAACAGGTGGTCTGGGAAC
AACTCGGACAATCTCACCCCCTTTAGGTTCTTCAACTTGTGCATCTGCTTTAACGACCAGTTCAGAGTTTGAGTTAGCTCCACATTTGACGATAA
ATGGGCTTGTGGAACCTGTGTTGAACTGAAGAACATTCCACTGTGTCACGTCAGTTTCTCCCCCTAATCCCACATTTGCAGGAGGCCGAGAAGCA
TGTATATTTTCATGAAGCCGGTCATCCTCTTCACGAATTAACTCAACAGCATGCCGTGCTTCATCAATGTGCCTCTGAGCACACGGATGATCAAT
GTCAAGCAAGGAAGGCATTCGCTCTGCTAGTTCATTTAGAGAAGCTAGCAAAGCTTTCTTCTACTCTTACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546901] | SGN-U571514 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347776 [Download][View] | Facility Assigned ID: TUS70I03_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0113 | Quality Trim Threshold: 14.5 |
Working
