Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E543412

Search information 
Request: 543412Match: SGN-E543412
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192285Clone name: TUS-65-D11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C95002 [cLEX-6-L24] Trace: SGN-T116277 EST: SGN-E304259 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543412Length: 557 bp (895 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E543412 [] (trimmed) GGACTCAGGGTATTCGCTAGTAACCCATTCCTCCGTCAAGACATACTGAATTCCATGCGGTGACCAAGTGGTATAACATGCCATTGAAAGAAAAT
GCAACCTATGATTATTTCCGCCGGTACTGGAGGAATTGCAGATCTTTCTTTTCATGCCGTTGGTTATACCTGGCAGATTATTAATTGTATTCTTG
ACAGCATCATATTCTTTGACTCTTCCCAGGGCCATGGACTCCGCCAATCAAGTGACTAAATCGGGGAACCTTGATGAATTCTCCGTGGCCCTGCT
AAATAACACCCTTTCACTGCCTTTGGGCATTTTGCTTATATTATTATTCAACGAGATGGACTATCTTTCTAGAACACCACTGTTACAATTACCAG
CTTTCTGGCTGGTGACTACCATTAGTGGATTGATGGGCTTAGCAATTAGCTTCACATCCATGTGGGTTCGTCATCAAACAGATGCTACTTCTTAT
AGTCTTGTCGGATCCCTAAATAAGATACCTCTCTCTGGTGCTGGTATTTTCCTTTTCCATGTTTCACCAAGCCTGGAGAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543412] SGN-U594241 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344287 [Download][View] Facility Assigned ID: TUS65D11_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0346 Quality Trim Threshold: 14.5