EST details — SGN-E543330
| Search information |
| Request: 543330 | Match: SGN-E543330 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192238 | Clone name: TUS-65-B12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94829 [cLEX-5-N18] | Trace: SGN-T116487 | EST: SGN-E303290 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192238 [TUS-65-B12] | Trace: SGN-T344206 | EST: SGN-E543331 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543330 | Length: 848 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543330 [] (trimmed)
AGTACAGTAAATGTTATTATTGAACTTCAAACATTATTCTTTAAATATACATTTTGTAACTCTTTCTTCTTTTAGTCTTTTCATATACATATACA
TGTTTTTTTAGAGTACTTGTTTCATCAACAATACAAATACAACCTTCTGCACATTCAAAGAAAATATTGCCTACTTCTGCTGCTTCTGTCTTGGA
GACAACACATGACCACCCTTCACCACAATTGCATATAACTTTGTCTTTGGAAGACACTTCTATAGCTGTTTGTGAATGTGAAATTTCTTTCGCGG
CTTCGCCCCTTCATAAGAATATCAAAAGTTCAGTAACCATACGTGAAATCAACCCTCAAAAGTCACATGAGTCTTTTTACAGGATTTGAACTTGA
TGAGTTTGATCGGACTCGAAATTTAATATTATACGAAAGATTTAATAAATTTCATACCAAGACTTATTTGTGAGTCTCATAAGATTATAAGTCCA
AGCACCAAATATGGCCCCCAAAGTTGGCCCAATAATGTAGATCCATAAACCTTTGTAATGACCTGTAACAATTGCTGGTCCCAAACTTCTTGCTG
GGTTCATTGATGCCCCTGTTAGTGGTCTGTATTTCAACAAAATCATATGTTTTACGATATCGGCTCAGGTGAAGGAAATCAAAGTAGAAATAAAG
AGAAAGAATTAAACTGTAACATCAAAAACAAAATTGTAATCACCTAAACATAATAAACAACAGACGATCATAGATACCAAAAGTCAAATACTATT
ACTACAACAAAGATAACTTTTAGCGGGTAATAAATATACACATGAATAAAGAGTGTTAAAGTATTTACCCGCACTAGTTAAGTTTCAT
TGTTTTTTTAGAGTACTTGTTTCATCAACAATACAAATACAACCTTCTGCACATTCAAAGAAAATATTGCCTACTTCTGCTGCTTCTGTCTTGGA
GACAACACATGACCACCCTTCACCACAATTGCATATAACTTTGTCTTTGGAAGACACTTCTATAGCTGTTTGTGAATGTGAAATTTCTTTCGCGG
CTTCGCCCCTTCATAAGAATATCAAAAGTTCAGTAACCATACGTGAAATCAACCCTCAAAAGTCACATGAGTCTTTTTACAGGATTTGAACTTGA
TGAGTTTGATCGGACTCGAAATTTAATATTATACGAAAGATTTAATAAATTTCATACCAAGACTTATTTGTGAGTCTCATAAGATTATAAGTCCA
AGCACCAAATATGGCCCCCAAAGTTGGCCCAATAATGTAGATCCATAAACCTTTGTAATGACCTGTAACAATTGCTGGTCCCAAACTTCTTGCTG
GGTTCATTGATGCCCCTGTTAGTGGTCTGTATTTCAACAAAATCATATGTTTTACGATATCGGCTCAGGTGAAGGAAATCAAAGTAGAAATAAAG
AGAAAGAATTAAACTGTAACATCAAAAACAAAATTGTAATCACCTAAACATAATAAACAACAGACGATCATAGATACCAAAAGTCAAATACTATT
ACTACAACAAAGATAACTTTTAGCGGGTAATAAATATACACATGAATAAAGAGTGTTAAAGTATTTACCCGCACTAGTTAAGTTTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543330] | SGN-U600928 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344205 [Download][View] | Facility Assigned ID: TUS65B12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 20.5 |
Working
