EST details — SGN-E543301
| Search information |
| Request: 543301 | Match: SGN-E543301 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192221 | Clone name: TUS-65-A19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94762 [cLEX-5-H20] | Trace: SGN-T116376 | EST: SGN-E303179 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192221 [TUS-65-A19] | Trace: SGN-T344177 | EST: SGN-E543302 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543301 | Length: 810 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543301 [] (trimmed)
AGAAATAAAAGCCGTATTATTGTTGTCCTCTGAGTGATGTGTACCATTACAAAATGATTATTGCTGTTTACATTCTGGTTGCTGACCTTGTTGCT
GTTGGTCTGGCTCAAAATCAGGATCTTCATCAGATTTATAATCTTCCGCCACTTCACCTATTCTAGCGCCACGGCCACCGCGACCGCCACGAGGG
CGAGCACCTCCTCTTCCTCTTGGAGCTTCCTCCTCTTCTTCTTCTTCTTCTTCCTCATCATCTTCATCATCGAAATCTTCTTCGTCGTCATCAAA
GTCTTCTCCGAACATTCCGCCGTACAGTTCAGCTGCTTCTCCAGTGAACCACAAGACAGCGTTAGGGATGATCTCATCCTTGACCATCAAGCCAA
GTTCGTAGTCGTCTTCAAGAATAGCTTGAAGTTCTTCAGGATCAGCATCCTCCATGCCTGCAGTAGGATTGAAGAAGTTGAAGAAGGATTGGCAA
GGCTCTTCGACAGTGATTGTCTTTACAGGTTGTTGAGCACCTCCTCGGCCTCCCCTTCCTCCTTTGCCTCCACGGCCACCTCTCTTGTTGCCGCC
TTGTTGCTTGGTGACCAATTTAACAGTGAGGTTCTTTCCTTGCTTCCATTTGATGTCGGTGCTTTCTACTTTGTCGAACATAGTGGTTCCAAATT
CTTTGTCAACAAGGAAGTAAGTCTTCTTGATAACGTCGTTTTCGAAGAAGTCGTTTGGATTGAAGTAGAATTCCAGAGAAAAGCTTTGGTTAGAA
ACTCCCTCCTTCTCGTATGGGGGTGCTTTGATTTCGTACAGGTGTTGCAA
GTTGGTCTGGCTCAAAATCAGGATCTTCATCAGATTTATAATCTTCCGCCACTTCACCTATTCTAGCGCCACGGCCACCGCGACCGCCACGAGGG
CGAGCACCTCCTCTTCCTCTTGGAGCTTCCTCCTCTTCTTCTTCTTCTTCTTCCTCATCATCTTCATCATCGAAATCTTCTTCGTCGTCATCAAA
GTCTTCTCCGAACATTCCGCCGTACAGTTCAGCTGCTTCTCCAGTGAACCACAAGACAGCGTTAGGGATGATCTCATCCTTGACCATCAAGCCAA
GTTCGTAGTCGTCTTCAAGAATAGCTTGAAGTTCTTCAGGATCAGCATCCTCCATGCCTGCAGTAGGATTGAAGAAGTTGAAGAAGGATTGGCAA
GGCTCTTCGACAGTGATTGTCTTTACAGGTTGTTGAGCACCTCCTCGGCCTCCCCTTCCTCCTTTGCCTCCACGGCCACCTCTCTTGTTGCCGCC
TTGTTGCTTGGTGACCAATTTAACAGTGAGGTTCTTTCCTTGCTTCCATTTGATGTCGGTGCTTTCTACTTTGTCGAACATAGTGGTTCCAAATT
CTTTGTCAACAAGGAAGTAAGTCTTCTTGATAACGTCGTTTTCGAAGAAGTCGTTTGGATTGAAGTAGAATTCCAGAGAAAAGCTTTGGTTAGAA
ACTCCCTCCTTCTCGTATGGGGGTGCTTTGATTTCGTACAGGTGTTGCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543301] | SGN-U598480 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344176 [Download][View] | Facility Assigned ID: TUS65A19_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
