EST details — SGN-E542173
| Search information |
| Request: 542173 | Match: SGN-E542173 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191568 | Clone name: TUS-63-F14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89129 [cLEW-11-M22] | Trace: SGN-T112947 | EST: SGN-E300107 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191568 [TUS-63-F14] | Trace: SGN-T343051 | EST: SGN-E542176 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542173 | Length: 738 bp (926 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542173 [] (trimmed)
GCAAAGTGCCGCATAGTTGAATATTGATTACAATAAACAGCATCTAGGGCACAAATGACCTTTGTGATAAAATCTGGAAAAATTATTGATACTAA
AAAAACCTTGCAGAAAAGAAGTTTTAAAAGATAAATTCAATTCATTACGCAGGATCTCAAGCAAGCCTTCCGTTTCAGCTAGTTTTTCAATTGAG
TTCCTGTACACATCCTCTAAGTTTTTCTTATCCTCTGTCACACTGTTGAGACATTGACTCAATTCCTTCTCCTTCTCCTTGGTCTCTGCCAGAAC
AACCTCCAGGCTTGATGATTTTGTTTGGAATATCACTACTTCTGCTTCAAGCTCAGATGCCCTGTCAGAGTGCTTCTTAGATTCTTCTTCTGCAG
TCGCACATTTCTTCTCCAATATGCTTATTTGTTCTTCAAGCTCCTGAATCCTATATTTCTCCGTTTCGAGCAATAGCTCCAAATCACTCGCCTTT
TTGCTAGTTTCCTCTACTTTAGAGTGTGATACCAGCATCAAGTCCTCTAGTTCACGGCTACGTTGATCTGTGGTATTGGCCCGATCTTCATGCTC
AGCGCACTTGTCAGCAACACTTCTAAGCTCTGCTTCAAGTTCTAAATTACGAGCACTTGATTTGACCAACTCAGAATCCAAATGAGCTATCTTCT
CCTCGTACTCCTGCAACCTAGTATCCAGCTGTTTCCTTTCTTCCAGGGTCTTCTCAAGGTTGGCCTGTACTTC
AAAAACCTTGCAGAAAAGAAGTTTTAAAAGATAAATTCAATTCATTACGCAGGATCTCAAGCAAGCCTTCCGTTTCAGCTAGTTTTTCAATTGAG
TTCCTGTACACATCCTCTAAGTTTTTCTTATCCTCTGTCACACTGTTGAGACATTGACTCAATTCCTTCTCCTTCTCCTTGGTCTCTGCCAGAAC
AACCTCCAGGCTTGATGATTTTGTTTGGAATATCACTACTTCTGCTTCAAGCTCAGATGCCCTGTCAGAGTGCTTCTTAGATTCTTCTTCTGCAG
TCGCACATTTCTTCTCCAATATGCTTATTTGTTCTTCAAGCTCCTGAATCCTATATTTCTCCGTTTCGAGCAATAGCTCCAAATCACTCGCCTTT
TTGCTAGTTTCCTCTACTTTAGAGTGTGATACCAGCATCAAGTCCTCTAGTTCACGGCTACGTTGATCTGTGGTATTGGCCCGATCTTCATGCTC
AGCGCACTTGTCAGCAACACTTCTAAGCTCTGCTTCAAGTTCTAAATTACGAGCACTTGATTTGACCAACTCAGAATCCAAATGAGCTATCTTCT
CCTCGTACTCCTGCAACCTAGTATCCAGCTGTTTCCTTTCTTCCAGGGTCTTCTCAAGGTTGGCCTGTACTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542173] | SGN-U577943 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343048 [Download][View] | Facility Assigned ID: TUS63F14_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0010 | Quality Trim Threshold: 20.5 |
Working
