EST details — SGN-E539739
| Search information |
| Request: 539739 | Match: SGN-E539739 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190151 | Clone name: TUS-59-K13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C77695 [cLES-2-P23] | Trace: SGN-T97207 | EST: SGN-E282047 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E539739 | Length: 788 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539739 [] (trimmed)
CAAGCAAATTCAAAGATTGGATAAATGGAACCGTTTCCAAATACAGGTTTGGATTGAAAAGAAAACAAACTCAAAATTTTAAAATGAAGAATGAC
ATCAATTCTACTAGCACATCTTTGTGCAATTGAAAGCTATATCAATCTTGCGTATATGATTTTATAAAAAATAACCTGAAATCACCTACATATTT
TTCCCTTTTGAAAACAAACAGATACTGCAAATTAACCAACCTCCTCAGCAGCAACAGCACGAGTAGTAGCAATAGCAGGAGCAGGAGGAGGAAGA
GTTGGTTGGCTCAATCCAGTTTCCACATCCCCTGCTGCTGCTGCTGCCGTTGTGTTCTGTTCCAGCAACGATTGTCGGCATGTTGGACATGAAGA
ATGTAAAGCCAACCAAATATCTATACACTTGACATGAAATCCATGGTGACATTTAGGCAAAACTCTCACTTTTTCACCATCAACGAATTCTCCGA
GGCAAATGGGACAATCAGTTGCCGGAATATTAACTCCTGATCCATAAACAGAGAGAGGAAGTTGCCTGAGTGTGCTCTTTTTCAGCCCTGTTGCA
GCTAATCGCGCAGTTTCTGACTCGAAAGCAAATCTCCTACTGCAACGTAACGCACATCTCACAATCGAATTCAATCCAAGAGCACATATTAATGC
ACAAAGCAGAGCAGCTAGTATAATCACCATGTTTGTATCGAAATTCGCTTCGTTTGAGTAACCATGGTGAGGTAACGGTTTGCTTATTGGTGGAA
CTACAGGATGTGGATCACAAGTAGCCTA
ATCAATTCTACTAGCACATCTTTGTGCAATTGAAAGCTATATCAATCTTGCGTATATGATTTTATAAAAAATAACCTGAAATCACCTACATATTT
TTCCCTTTTGAAAACAAACAGATACTGCAAATTAACCAACCTCCTCAGCAGCAACAGCACGAGTAGTAGCAATAGCAGGAGCAGGAGGAGGAAGA
GTTGGTTGGCTCAATCCAGTTTCCACATCCCCTGCTGCTGCTGCTGCCGTTGTGTTCTGTTCCAGCAACGATTGTCGGCATGTTGGACATGAAGA
ATGTAAAGCCAACCAAATATCTATACACTTGACATGAAATCCATGGTGACATTTAGGCAAAACTCTCACTTTTTCACCATCAACGAATTCTCCGA
GGCAAATGGGACAATCAGTTGCCGGAATATTAACTCCTGATCCATAAACAGAGAGAGGAAGTTGCCTGAGTGTGCTCTTTTTCAGCCCTGTTGCA
GCTAATCGCGCAGTTTCTGACTCGAAAGCAAATCTCCTACTGCAACGTAACGCACATCTCACAATCGAATTCAATCCAAGAGCACATATTAATGC
ACAAAGCAGAGCAGCTAGTATAATCACCATGTTTGTATCGAAATTCGCTTCGTTTGAGTAACCATGGTGAGGTAACGGTTTGCTTATTGGTGGAA
CTACAGGATGTGGATCACAAGTAGCCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539739] | SGN-U576833 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340614 [Download][View] | Facility Assigned ID: TUS59K13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0024 | Quality Trim Threshold: 14.5 |
Working
