EST details — SGN-E539384
| Search information |
| Request: 539384 | Match: SGN-E539384 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189944 | Clone name: TUS-59-B22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C70902 [cLER-16-E13] | Trace: SGN-T95452 | EST: SGN-E284179 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189944 [TUS-59-B22] | Trace: SGN-T349087 | EST: SGN-E548212 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E539384 | Length: 792 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539384 [] (trimmed)
ACGTTCTAAAATCACTCAACTAAATTTATCATTAATAAAATATATATATCATGGGCAAAACAGATTCTTTCTTTATGTCATATACATAATATGGA
TCACATACACAAACAAACAAACTCATTATGATGATTCTTCTCTCTGTTGTGGTAGGAGATATGTGTAACAGTAAAGTTGTCTGTTTGTGACACCT
ATAGGTCACAAGTTTGTGTCGTAGAATTAACCTGTACCAGGATTGAGCTCCCTACATTACACTCTCTTGTCGTGCGGTCCTTCTCCAGACCAATG
TTAATGCAAGATACTTCGTGCAGCAGACTGCTCTTTTATGTTGAACCCCTCGAGAATGCTATTGTGAGGTGAACTCAGAACAACAAGGTTAGGAC
TTTGTTCCTGCAAACATGAGGCAGTAAGGTCTATGCAGTACAATTTTGAACTCTTTTGACGCACCTCGACTACCAGCTTCAAAAATATGGTCAAT
AAACACAAGAGATATTGATATTTTTCCCACTCTTATTGCACTACACATTTCACAGCTTCCGAGATGGATTCATTCGATGCACCAACTTGAATATC
TGTAATAAATTATGTACAGGGAGGAAGTCATCTAAATGGTTCAACAGGTTCAGTTTCTTCCAGAATAATAGCAGCTTCAAAACAGTCAGCAGCTT
CCGCGGCTGAACCTAAACCTCCCTCTTTGTATAACAGGCCTAGATTATACCATGCAGAAGCATTCATCCGATCAAGACGTAGTGCTTCTGTTAGA
AGGCTTCGAATAATTGCAGGAGACTGTTTACC
TCACATACACAAACAAACAAACTCATTATGATGATTCTTCTCTCTGTTGTGGTAGGAGATATGTGTAACAGTAAAGTTGTCTGTTTGTGACACCT
ATAGGTCACAAGTTTGTGTCGTAGAATTAACCTGTACCAGGATTGAGCTCCCTACATTACACTCTCTTGTCGTGCGGTCCTTCTCCAGACCAATG
TTAATGCAAGATACTTCGTGCAGCAGACTGCTCTTTTATGTTGAACCCCTCGAGAATGCTATTGTGAGGTGAACTCAGAACAACAAGGTTAGGAC
TTTGTTCCTGCAAACATGAGGCAGTAAGGTCTATGCAGTACAATTTTGAACTCTTTTGACGCACCTCGACTACCAGCTTCAAAAATATGGTCAAT
AAACACAAGAGATATTGATATTTTTCCCACTCTTATTGCACTACACATTTCACAGCTTCCGAGATGGATTCATTCGATGCACCAACTTGAATATC
TGTAATAAATTATGTACAGGGAGGAAGTCATCTAAATGGTTCAACAGGTTCAGTTTCTTCCAGAATAATAGCAGCTTCAAAACAGTCAGCAGCTT
CCGCGGCTGAACCTAAACCTCCCTCTTTGTATAACAGGCCTAGATTATACCATGCAGAAGCATTCATCCGATCAAGACGTAGTGCTTCTGTTAGA
AGGCTTCGAATAATTGCAGGAGACTGTTTACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539384] | SGN-U582775 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340259 [Download][View] | Facility Assigned ID: TUS59B22_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
