EST details — SGN-E537686
| Search information |
| Request: 537686 | Match: SGN-E537686 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188906 | Clone name: TUS-56-G16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C48970 [cLEI-6-I23] | Trace: SGN-T80726 | EST: SGN-E265940 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188906 [TUS-56-G16] | Trace: SGN-T338558 | EST: SGN-E537683 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537686 | Length: 809 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E537686 [] (trimmed)
GTTTAGACCTAATCTATTTCTCCTCATAGATCACAGCCATGGAAAAAGCATCGCTGCTAGTGGCCCTTTAGGTTGGAAAAGAATTACTTAAACGA
ATGACATAATTTGCATTTCTTGTATACTTAAAAAACCTGCACCTTAGATTGCCAAAGGTGATAAAATGTCATGATGAAACATCAGATCTCTTGTA
GTCAATTTGTGCTGGTAAAACCAACTTTTGGATTTATCCGAGTTCAACAGCTTGAGAGTTGAGTTTTAGAAGTTGAAGCTAGTAAAGATGTATTA
AGGCATTCTGGAACAGTGATAGGAAGCATAAGAAGCTACTTATAAGTGGAAAACAATCACCTCATCAGAGTACTGATCTATCATTTTCTCTCAAC
TTCTATCATGAAATGTCGAAGAAAAATGAACATACCATACTGTAGAGGCAAGTCTTTCATACCTCAGACTGAAAACAAAAGTTGGCTGAATGGTT
CAGGCATTAACAGGATGAGCTGGTGCTAGTCATAGCAACTTTTTGTCCTGAGCATCGATTTCTATGAAAATATGAATGTCGTAAAGGTCTAAGGT
CAATGAATCCGGTGTGACAAAACTCCTTTCTCGATAGTAATTCTAGATTTTTATATCCAATGCTTCCTAGTTTAGGCAAAAGGAACCAGCTTGAG
TTGCTTGTATGCTTTCTGAACTCTACTCACCAAGAATTATGTTACCATATCGATGTATGAATTCGATAAGATATTACTCACCCTCCCAAAACTAC
GCTACAGATCTTNGATTATATACTGAGATGTTATAAAGAGAGATCACTC
ATGACATAATTTGCATTTCTTGTATACTTAAAAAACCTGCACCTTAGATTGCCAAAGGTGATAAAATGTCATGATGAAACATCAGATCTCTTGTA
GTCAATTTGTGCTGGTAAAACCAACTTTTGGATTTATCCGAGTTCAACAGCTTGAGAGTTGAGTTTTAGAAGTTGAAGCTAGTAAAGATGTATTA
AGGCATTCTGGAACAGTGATAGGAAGCATAAGAAGCTACTTATAAGTGGAAAACAATCACCTCATCAGAGTACTGATCTATCATTTTCTCTCAAC
TTCTATCATGAAATGTCGAAGAAAAATGAACATACCATACTGTAGAGGCAAGTCTTTCATACCTCAGACTGAAAACAAAAGTTGGCTGAATGGTT
CAGGCATTAACAGGATGAGCTGGTGCTAGTCATAGCAACTTTTTGTCCTGAGCATCGATTTCTATGAAAATATGAATGTCGTAAAGGTCTAAGGT
CAATGAATCCGGTGTGACAAAACTCCTTTCTCGATAGTAATTCTAGATTTTTATATCCAATGCTTCCTAGTTTAGGCAAAAGGAACCAGCTTGAG
TTGCTTGTATGCTTTCTGAACTCTACTCACCAAGAATTATGTTACCATATCGATGTATGAATTCGATAAGATATTACTCACCCTCCCAAAACTAC
GCTACAGATCTTNGATTATATACTGAGATGTTATAAAGAGAGATCACTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537686] | SGN-U585716 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338561 [Download][View] | Facility Assigned ID: TUS56G16_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |
Working
