Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E479768

Search information 
Request: 479768Match: SGN-E479768
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C227611Clone name: cSTD-11-E2
nocartOrdering Not Available
Library Name: cSTDOrganism: Solanum tuberosum

Tissue: dormant tuber
Development Stage: one month post harvest

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E479768Length: 517 bp (884 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E479768 [] (trimmed) GTTTTAGAGTTCAAGCTCCACTGGTTGATTCCGTGTCATGCTATTGCAAGGTTGACTCAGGGTTTAAGACTGTTGTAGGGGCAAGAAAGTTTGTC
GCAGGATCAAAAATTTGCATCCAGCCAGACATTAATCCTCACGCACACAAGACTAAAAACTCCCGTAGGGAGAGGTCAAGAGTGCAGTCACCTCT
TCTGCCTGGTCTACCAGATGATCTTGCAATTGCTTGTCTAATACGTGTTCCTCGTGTTGAACACAACAAGCTCCGTTTAGTCTGCAAAAGGTGGT
ATCGGCTTCTTGCTGGAAATTTCTTTTACTCTCTCAAGAAGAGTCTTGGAATGGCGGAGGAGTGGGTATACGTGATAAAGAGAGATCGTGACGGA
AGGATTTCATGGCATGCATTTGATCCAACATACCAACTATGGCAGCCACTTCCACCTCTTCCTGGGGAATATAGTGAAGCCCTTGGATTTGGTTG
TGCTGTTCTTAGTGGTTGCCATCTCTACTTGTTTGGAGGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E479768] SGN-U291022 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T224989 [Download][View] Facility Assigned ID: PTDBP25TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0125 Quality Trim Threshold: 14.5