Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E461951

Search information 
Request: 461951Match: SGN-E461951
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C247152Clone name: cPRO-10-I11
nocartOrdering Not Available
Library Name: cPROOrganism: Solanum tuberosum

Tissue: roots
Development Stage: in vitro grown stem cuttings

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E461951Length: 600 bp (858 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E461951 [] (trimmed) AGTGGAGCTGATAAACGATGTCGAAAAACAGGAAAACCAAATCAAACCCACCCCCATGTCTCTATTCCTCTTTGTGTACATGAGTAAACAAGGAA
TCTAAGATTCTTATGCTGTAATTGTGGTAAAAATCCAATCTTTTTTGCATTTCTGTGATTGTTGCGAATAAAAGATTCAAACCCAAAATATAAAA
AATGAGCTTGGATCCAGTGGTGTCTTCTTCTCAAGGGAATCTTGATGATCAGATTGCTCAGCTTATGCAATGCAATCCCTTATCTGAACAATAGG
TAAAAGGATTATGTCAGAAAGCAAAGGATATATTAATGGATGAAAGCAACGTGCAACCTGTGAAAAGCCCTGTGACTATATGTGGTGATATTCAC
GGCCAATTCCATGATCTTGCTGAACTTTTTCGTATTGGTGGGAAGTGTCCTGACACTAACTATCTATTTATGGGAGATTATGTAGATCGTGGATA
CTATTCTGTGGAAACAGTAACGCTTTTGGAGGCTCTCAAAGTGCGTTATCCTCAACTGATTACGATTTTGAGGGGAAATCATGACAGTCGTCTCA
TTACTCAGGGTTATGGGCTTTATGATGAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E461951] SGN-U288134 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T247527 [Download][View] Facility Assigned ID: PROBK54TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0287 Quality Trim Threshold: 14.5