Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E435786

Search information 
Request: 435786Match: SGN-E435786
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C281771Clone name: STM-62-G13
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C281771 [STM-62-G13] Trace: SGN-T287922 EST: SGN-E435785 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E435786Length: 740 bp (907 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E435786 [] (trimmed) TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCGCACGCACAAATTTCAAATCATTATTATCAATATATTGTTTGACAACTGGTTTAAGTG
GAAGTTGCTAAGCAATATTTTCATAACAAAATTGAAAATCTCAAACAACAAATTTGTTAGCTATGCATTAAATTTGCGGGCCTTCTGTACAAAAA
ATATGTAAGTTACGTCCAAAACTAGTTGCTCACACGTCAATTATGTACAAATATGAATGTAATCCAACTATAACATCACACTCCCTCCTCTAAAA
AAAAATGAGGCAGAGTGCAACATTCTAGCAAAGCTTACTCAATCACCAACTCGAAAGCCCATTGTGTATATTTCCGGCACGGTCCTTTTACCTGC
AAACTTCGTCTCGAGTATATATACCAGGATTGAATCCAAATTGTTGACACATCTAAAGATCAACCTAAGACATCAATGCTGTTCCCACCCAAATC
AGGTTTTGTATTGTGAAGGCCTGCCTCTCCGCCAACATGAGTTTGTCACTTTCAATTTGTTCTCCTTCAAAGATTCCATGGATTCAGCAAGCTCT
ACTTGTTGCGATGCTGTTGCAAGTAGTGCTTTCTTCGTCCTCTGCAAGTCATACTCTATGAACTTTATGCGGTCCATTGAATCAAGCAGCATGAG
CTCTTTTTCTGGAGGAATTTTGGTTGGTTTCTTCAACAAATCAGCTACGACGTTCTCTAAATGTTGCAACCTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E435786] SGN-U294547 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T287923 [Download][View] Facility Assigned ID: STMJK43TV
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0132 Quality Trim Threshold: 14.5