Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E399711

Search information 
Request: 399711Match: SGN-E399711
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C205515Clone name: cSTC-2-K23
nocartOrdering Not Available
Library Name: cSTCOrganism: Solanum tuberosum

Tissue: sprouting eyes from tubers
Development Stage: 12-14 weeks post harvest

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399711Length: 586 bp (920 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E399711 [] (trimmed) CTATTTCTAATACCGCAACCATTACCCGAAATGGGTTAAGGAAAGTGAAAAGTGCAAGAGTATCCCCAGTGAGCAGAAGGAATCGTAGTTCGTTT
TACGAACGTTCAAATTCATTTGTTGGTACTGAAGAATACGTAGCACCAGAAATTGTACGTGGAGAAGGTCATGAATTTTCAGTAGATTGGTGGGC
GCTGGGTATTTTGTGCTACGAAATGTTATACGGAACGACGCCGTTTAAAGGGAAAAATAGGAAGGAAACGTTCAGGAGAATATTGATGGCGGAAC
CGGAATTCATTGGAAAGAAGAATGATTTAGCCGATTTGATTGGAAAATTGCTCGAGAAAGATCCCACGCGCCGGTTGGGTTACCGAAGAGGCGCG
TCGGAAATAAAGGAACATGAGTTTTTTCAGGGGATGAGATGGGATTTATTAACTGAAGTTGTACGTCCGCCGTTTTTGCCGTTAAGAGATGTAAC
GGAAGAAGTGAAGAAAGGTGGGATTAACATAACGGAGTATTTTCAGAAATTGAAGGCACCACCGTCACCGTTATGGTCACCTTCACATGATGAGT
GGACAAATAACGTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399711] SGN-U298210 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200584 [Download][View] Facility Assigned ID: PSEAE72TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0058 Quality Trim Threshold: 12.5