EST details — SGN-E397035

Search information 
Request: 397035Match: SGN-E397035
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184212Clone name: TUS-44-D2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184212 is on microarray TOM1 spot ID 1-1-7.4.16.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72447 [cLER-20-D18] Trace: SGN-T96805 EST: SGN-E285233 Direction: 5' Facility: TIGR
Clone: SGN-C184212 [TUS-44-D2] Trace: SGN-T198362 EST: SGN-E397036 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397035Length: 436 bp (897 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397035 [] (trimmed) AAAGTATATTCTAAATTCATACAAACACAATCAACTATTTTGAACTCTTACACACATGTACTTATGGAGGATATGGTTGAGAAACCAAAGCCTCA
AAAGAAGAAAATGTATACTATATGCTACATATATAATCTTCAAAAAAAGAAATATCAAAATCACACCAAAGCTAAAACTATTCCCTATGACACTA
TTTAACTACTAACAACAAATGATTAAATATACCTAACTAGAAAAAAAGAAAATATGCCACTTTCTTTGTGTGTGCATTTATAGTAAAACTAACTT
TGTGAATGAAAAAGTTCCTCCCTCACACATAATCCCACATTTCCAAAGCACATAATTTTTTTTGTCCCACTTGTCAAAAATGGTACGCTAAGCGG
GAAGTAAAATATAAAAACCTTCTTGTCCATCAATCTAATATTTGCATTACTTTGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397035] SGN-U572185 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198361 [Download][View] Facility Assigned ID: FA0AAD32DB01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.910 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5