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EST details — SGN-E396145

Search information 
Request: 396145Match: SGN-E396145
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183041Clone name: TUS-41-C7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183041 is on microarray TOM1 spot ID 1-1-2.3.3.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C109849 [cLPT-1-E15] Trace: SGN-T177601 EST: SGN-E366176 Direction: 5' Facility: TIGR
Clone: SGN-C109849 [cLPT-1-E15] Trace: SGN-T177602 EST: SGN-E366177 Direction: 3' Facility: TIGR
Clone: SGN-C183041 [TUS-41-C7] Trace: SGN-T191469 EST: SGN-E390143 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396145Length: 524 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396145 [] (trimmed) GCTATACGAGGTCATGGCAACCAAGAGTAAGATTTACTTTGTGATCGAACATGCCAAAGGTGGCGAGCTTTTCAACAAACTGACAAAGGGGAGGC
TCACAGAAGATGTTGCTAGAAAGTTGTTTCAGCAACTGATCAATGCAGTTGAATTTTGCCACAGCCGAGGTGTTTATCACCGTGATCTCAAACCG
GAAAATCTCCTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCAGAGTCTAAGCGACAAGATGGGTTACTCCA
CACAACCTGTGGTACACCAGCATATGTTGCTCCCGAGGTGATTGGTAGAAAAGGATATGAGGGTGCTAAAGCTGACATCTGGTCTTGTGGGGTGA
TTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTCTATGACTTAGGGTCGGAGGAATCTGTATAGGAAGATATGCAGGGCATAGTACAAATGCCC
TTAATTGGTTCCCTCTAGAAGTGCGTAAAACTTTCTCTCTAAGATCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396145] SGN-U572172 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197471 [Download][View] Facility Assigned ID: FA0AAD29AB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5