EST details — SGN-E395642
| Search information |
| Request: 395642 | Match: SGN-E395642 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C173842 | Clone name: TUS-17-C24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173842 is on microarray TOM1 spot ID 1-1-1.3.17.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C5682 [cLEC-32-K21] | Trace: SGN-T29799 | EST: SGN-E207586 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C173842 [TUS-17-C24] | Trace: SGN-T196969 | EST: SGN-E395643 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E395642 | Length: 622 bp (825 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E395642 [] (trimmed)
CACACCCCCAACTTATTTTTTTCCTTTATTCAAACATTTTACCAAAAAAGGAAAAAAAAAAAAACTTTGAGTTCTATTTCCCACAAAACTATTCC
CTTTTGAGGGGCTTTCCCCCCCCTTTTTCTTGAACAAATTTTACGGGAGAAAAGAAACCTTTCTTCTTTGAACGGCCAGGGAAGGCCCTCCCCAA
AAATTTTCCACCTTTGCTTAGGCCCCGGCCAACACCCCCAAACCCCCTTCCAACAAGGCCTACCCCGGCCCCTAGCCCCGTTCCAACGAGGCCCC
CCCCGGCCCCAAGGCCCCTTCCCCCCATACCAACCCCTGAACCACCCCCATCCTTTGGGCGGCCAAAAACCCCTTCGGCTTTCACCTTCTTCCTT
TCTTCAAGGATCCCTTTCCCGGCCCCCAAAACACCTAACGGCCCTTCCTTGTTGAACCCAGGAAACACCCCCTTTATTGGGAAAGGGCCCCAATC
CTTCTTATCTTTGACTTTGACCATATCAAGTTTGGAAAGTAACCTTAATTCATTTTCTTTACCACCATCACCTACAACCCCATTCAAAGGCAATT
TTGCAACCCCCATTCGCGGGTCTTGCCCAAAATTGTCTTTATCAAAAACCCC
CTTTTGAGGGGCTTTCCCCCCCCTTTTTCTTGAACAAATTTTACGGGAGAAAAGAAACCTTTCTTCTTTGAACGGCCAGGGAAGGCCCTCCCCAA
AAATTTTCCACCTTTGCTTAGGCCCCGGCCAACACCCCCAAACCCCCTTCCAACAAGGCCTACCCCGGCCCCTAGCCCCGTTCCAACGAGGCCCC
CCCCGGCCCCAAGGCCCCTTCCCCCCATACCAACCCCTGAACCACCCCCATCCTTTGGGCGGCCAAAAACCCCTTCGGCTTTCACCTTCTTCCTT
TCTTCAAGGATCCCTTTCCCGGCCCCCAAAACACCTAACGGCCCTTCCTTGTTGAACCCAGGAAACACCCCCTTTATTGGGAAAGGGCCCCAATC
CTTCTTATCTTTGACTTTGACCATATCAAGTTTGGAAAGTAACCTTAATTCATTTTCTTTACCACCATCACCTACAACCCCATTCAAAGGCAATT
TTGCAACCCCCATTCGCGGGTCTTGCCCAAAATTGTCTTTATCAAAAACCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E395642] | SGN-U597447 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196968 [Download][View] | Facility Assigned ID: FA0AAD5BB12FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.880 | Expected Error Rate: 0.0267 | Quality Trim Threshold: 14.5 |
Working
