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EST details — SGN-E394404

Search information 
Request: 394404Match: SGN-E394404
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182648Clone name: TUS-40-B22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182648 is on microarray TOM1 spot ID 1-1-3.2.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133666 [cTOD-6-J4] Trace: SGN-T143276 EST: SGN-E331305 Direction: 5' Facility: TIGR
Clone: SGN-C182648 [TUS-40-B22] Trace: SGN-T199608 EST: SGN-E398282 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394404Length: 295 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394404 [] (trimmed) AGCAAATGCTATAGCATTATTAGCATATAGTTCAACAAATGGCTTTCCCTTAGGGTCACTATATAATAATTGATCTGAACCTAGTACCCCAATGC
CCTTCATCAAATTCTTGAACAACACATTGTCAAAATTACCAGGACTTAAAACATCTAGGAAGGCTGACATGTCACTGTTATTAGTATAATTTGCA
CACATTTTGCTCAATCTTTCAACTAATACTGGGTTCATTGTAGGGTCAGGAGTTGGGAAAATCCTATGACCAAACTCTTTACAATGAACAAATCT
AATTGTATGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394404] SGN-U575257 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195730 [Download][View] Facility Assigned ID: FA0AAD28DA11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.922 Expected Error Rate: 0.0096 Quality Trim Threshold: 14.5