EST details — SGN-E392905

Search information 
Request: 392905Match: SGN-E392905
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181491Clone name: TUS-37-B17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181491 is on microarray TOM1 spot ID 1-1-8.2.12.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C66624 [cLEN-14-O10] Trace: SGN-T90241 EST: SGN-E276695 Direction: 5' Facility: TIGR
Clone: SGN-C181491 [TUS-37-B17] Trace: SGN-T194037 EST: SGN-E392711 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392905Length: 513 bp (829 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392905 [] (trimmed) ATTTCAGACTTGTTTCGTAAGTACAATCAAACAGTATCATTCTCAGGTGGGCTAATATACATTTCTTTATAGGATAAAGAAGGAACTTTTTTAAA
AATAACAGTTTAATACGTTAAGCTTTTGATACACACTCATCTTTAGCATATCCATTTCTGCGAGAAGTTGTTTCGACTTTCACCACTGGAAACTA
TAATAATATCTTTATTCACACAACAACAACTCTTGCCGAATCACTCCAATTTAGCAAGAAAAAATAAATATAGAGGATATTTTAACACAATAACT
TATTAATTTAGAGGGCATTCATGAGGGAACCCTTGAGGGAAACGTTTAGTATCAGTGTAATAATTGTATATCTTATAGTTCTTTTGCGCCCAGTT
CATCCTTGCTACCCCAGCGTTGACCAATGATTGAGTTAACCAAGAATTGGCTGAGGGAATTCTTGGAAGTTTGGGCATTGAAGTTTCAATGAGAA
GCAATAAAAGGGGCTTTACTCCAATCAGTCCTTACAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392905] SGN-U591415 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194231 [Download][View] Facility Assigned ID: FA0AAD25CA09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0315 Quality Trim Threshold: 14.5