EST details — SGN-E391305

Search information 
Request: 391305Match: SGN-E391305
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185603Clone name: TUS-47-N1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185603 is on microarray TOM1 spot ID 1-1-8.2.9.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5762 [cLEC-32-P18] Trace: SGN-T29912 EST: SGN-E207699 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391305Length: 667 bp (891 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391305 [] (trimmed) CCAGTAGCATCCTCCTCTTCGCGCCGTCTGATCAACACCCTAGGAATCATTTGCAATGACAACTTTTCCAGGGCGACTATTATGGGAGATGGGGA
AGAATAACCACTCCTTTTTACTGAAGGAGGTCGGTAATGATACCGCTGGCGTCGCCTTCCTCAGAGATCCGAACAGTCTGCTACGACCTTCACTC
CGACGAGCACTCTGGCCTAGCAGACAAGAAAACTGTGACTATCCAGCCTGATGGCAAAGATAAATCTGTGTTGCTTGCTACATCGAAAACCAAGA
AGCAAAACAAGCCTTCAAGGTTGTTGAACAAGTCTGTGATGAAGAAGGAATTCAGCAGAATGGCCAAGGCTGTAACAAACCAGGTTGGAGACAAC
TACTACAGGCCAGATCTGAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTCACAGGAGTCTCAAGGTCACCAAGTCAGGTGCCAAGAAGAGGAA
CCGACAGGCTTAAGAGTTCATGCTAGGAAATGCTACAGTGTATGACTTGTAATGCATGGGTTTCTCCAGTACCAAAGTTTTGTGTTCGACTTTAT
CTTTGTTTCTTTCTGAATTAGCTATTGGCAAGGGCAATCTCTAGTTTTGAGTTTAAAATGACCTCCTTTATCAGAACATTAAAAAATTATCTACA
TT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391305] SGN-U593673 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192631 [Download][View] Facility Assigned ID: FA0AAD35CG01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0226 Quality Trim Threshold: 12.5