EST details — SGN-E380064
| Search information |
| Request: 380064 | Match: SGN-E380064 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168740 | Clone name: TUS-3-O10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168740 [TUS-3-O10] | Trace: SGN-T636 | EST: SGN-E379539 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E380064 | Length: 744 bp (807 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E380064 [] (trimmed)
GATTGTCTCAGTATCGTTGTCGTATAATATTGTACAATTTATTAGATAAATAGATTAGACAAACTTTTTTTTAAGTAGTTTCCCCATTTGGTAAT
TACTTTTCTTTAATCTCATTTTCAACATTTTCCTTCTTCTCATCAACAAATTCCAGTTGTGTTATTTCCATTTTTCTAGCCTTTTCCTCTTCATT
CTCTTTTATCTTTTTGTAAAGAAAATTAATCAACCCTTTAAGTGAATTCTCAACTTCATCTTCCTTCAACAATTGCTCTGCCACTTCTGCTGGTG
TCACATTGGCTATATCAATCAATTCTTCAATTTCTTTGAACAATTTATGATCTTTAATCCCTAAGTAATTGTTAGCAAGAAGTTTGAATCCACAA
GGTGTGCAATATGTCATGTGAATGTGCATGTCCATTCTACCAGGTCGTAACAATGCAGGATCGAGTTTCTCTATGTGATTTGTTGTGAAAATTAT
GATTCTTTCGTCTCCACAACTCGACCATAATCCATCAATAAAATTCAGTAAACCTGATAATGTAACCTTGTGTTCTTGCATATGAAAACCATTAA
TTGAATGAACATAAGTAGCTCGATTAGCCAAGTTATCTTGCAAGTCGATGGTACAATCAATGTCCTCCACCACCAAAATGGATTTATTGGCTGTA
GCAACAACAACCTTCGTAACTCTAAGTTCCCCCTCAGCGAGGTCAACTNCAAATCATATATATCAAAGTTCAAATAATT
TACTTTTCTTTAATCTCATTTTCAACATTTTCCTTCTTCTCATCAACAAATTCCAGTTGTGTTATTTCCATTTTTCTAGCCTTTTCCTCTTCATT
CTCTTTTATCTTTTTGTAAAGAAAATTAATCAACCCTTTAAGTGAATTCTCAACTTCATCTTCCTTCAACAATTGCTCTGCCACTTCTGCTGGTG
TCACATTGGCTATATCAATCAATTCTTCAATTTCTTTGAACAATTTATGATCTTTAATCCCTAAGTAATTGTTAGCAAGAAGTTTGAATCCACAA
GGTGTGCAATATGTCATGTGAATGTGCATGTCCATTCTACCAGGTCGTAACAATGCAGGATCGAGTTTCTCTATGTGATTTGTTGTGAAAATTAT
GATTCTTTCGTCTCCACAACTCGACCATAATCCATCAATAAAATTCAGTAAACCTGATAATGTAACCTTGTGTTCTTGCATATGAAAACCATTAA
TTGAATGAACATAAGTAGCTCGATTAGCCAAGTTATCTTGCAAGTCGATGGTACAATCAATGTCCTCCACCACCAAAATGGATTTATTGGCTGTA
GCAACAACAACCTTCGTAACTCTAAGTTCCCCCTCAGCGAGGTCAACTNCAAATCATATATATCAAAGTTCAAATAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E380064] | SGN-U581833 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1022 [Download][View] | Facility Assigned ID: 240_G10_TUS03O10.Td_072.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.932 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 20.5 |
Working
