EST details — SGN-E377983

Search information 
Request: 377983Match: SGN-E377983
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175152Clone name: TUS-20-J14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175152 is on microarray TOM1 spot ID 1-1-3.2.13.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24014 [cLED-6-P19] Trace: SGN-T50264 EST: SGN-E233278 Direction: 5' Facility: TIGR
Clone: SGN-C175152 [TUS-20-J14] Trace: SGN-T190206 EST: SGN-E377984 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377983Length: 589 bp (948 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377983 [] (trimmed) GGGGGCCCCGGAACCAAATTTTAAAAAAACAAAAAAGCAAAAGAATTTAACTGGGGCCAAAATCAAAAAACCCCCCCCCCCCCCAAATTCAAAAT
TTTTTCAAACCCCTTTAGGGCAACTTTCCCACAAAAAACCCCCCCACAAAAAAAAAAACCCCCCCCCCAAACAAAAAAAAAGTTTTAAAAACCAA
ACCATCCTCCCCCCCAATCGGTGTTCCCCTGGGAGCGCCTTTTCCCCCCAAACCCCGGAGGGGGCCGGCTTGGAAGGGCCCCCAACAGGGCCCCC
AAGGGAACCCCCTTGACCCCTGGGGAGTTGGGGAAGCTGGGCCCCCACCTTTCCAAAAAAAAGGGGCCCACCCCTTTCGGCAAGGGGCTTTGGGA
AAACCCACCCCCTTTTTTCGTATTTGCCCCCGCCCCCCCCATTCCCCAACCCAAGTTGGGCAAAGACTTGGTTAGGGAAAAAACAAAAAATCACA
AAACTGGGGGGGCCCGGGGCCCATCCCAAGTTCATGAAACAACCCCTGGCCAACACAAAGAGCCCCCTGGTGGGGTTTGGGAAAACCCATCTGGG
GGGTTGGGGGTTGATTGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377983] SGN-U601384 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190205 [Download][View] Facility Assigned ID: FA0AAD8DE07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.842 Expected Error Rate: 0.0256 Quality Trim Threshold: 14.5