EST details — SGN-E377101

Search information 
Request: 377101Match: SGN-E377101
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175615Clone name: TUS-21-M21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175615 is on microarray TOM1 spot ID 1-1-4.1.13.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15607 [cLED-13-G9] Trace: SGN-T51796 EST: SGN-E236518 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E377101Length: 644 bp (894 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377101 [] (trimmed) AATTGATATCACTCTTCTTATTTTGGGAAGTGTTTAAGTGTTGATGCTATTTTCAAGAATCCAAATTCAAGAAAATTTTGAATTTTGAAGTTTAA
GGTGGTGTATGTTCTCTGTGATACTATCTTTTCAATTACCACCTCAATATTTTACTTACAGAAGTCAAATCAATATTTTGAACTTCGTGCTCGTC
AAGTCCATGATATCAAATCGGAATGTAAGTAGAATATATGTGTTTACCTTGAACTTTTTGCAGAATTCAACAGAGCTCCAAGATGATTCATCCAA
GGGATCTTAACACATTTAAGGTACCATCAACTGCCGGATTCAAGATTTCAACCTGCAGCATGGACAATTAGTTACTTGAAAGTGATTCCCTCCGT
TCAATTGATATTGTAATCTTTTCATTTTGAGAAGTTTTGAAATGTCCGACTAGTGTGTTTAGTCAAATATTGTCATATAAAATGAAACAAACGGA
AACATTTTGGATACCGTGACATCAAAAGTAGCCTTCCCCAAGACAGGTGAGGCAGTATGAAAAACACCTTCACAGCCCATAATAGCATCATCAAA
GCTGCCTTCATCTGTTAGATTAGCCTTCACCAGACGAAGTCTCTCTTTTGCTCCTTGTAGCTTTCATAGATGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377101] SGN-U594186 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190292 [Download][View] Facility Assigned ID: FA0AAD9AG11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5