EST details — SGN-E376694

Search information 
Request: 376694Match: SGN-E376694
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174602Clone name: TUS-19-C16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174602 is on microarray TOM1 spot ID 1-1-1.3.15.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174602 [TUS-19-C16] Trace: SGN-T189307 EST: SGN-E376693 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376694Length: 419 bp (916 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376694 [] (trimmed) CAGCCACTTCCTATTGGATTCGCAGTGTTCTTGGTTCATTTGGCCACCATCCCCATCACCGGAACTGGCATCAACCCCGCCAGGAGTCTTGGAGC
TGCTATCATCTACAACGACGAGCATGCATGGAATGACCACTGGATCTTCTGGGTTGGACCAATGATTGGAGCTGCTCTTGCTGCTATTTACCACC
AAATAATTATCAGAGCTATGCCATTCCACAGGTCTTAAGTTATCTGTCTTTAAACAATGGGATTCTCAAAGACTCAACAGTGTACTTTTGTCTTC
TTTTTTTGGGGGGTTGAATGTTCAAGTTTCTCCTTCAATGTATTTGTAATGTGGATCTGTTCCTTCTGTTAAGATGTTCTATTATGTGTGTAAAT
TATCAGGTTATGATAATGTAATGTACCTTATCAATGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376694] SGN-U577367 Tomato 200607 Build 2 156 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189308 [Download][View] Facility Assigned ID: FA0AAD7BB08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.926 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5