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EST details — SGN-E373979

Search information 
Request: 373979Match: SGN-E373979
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180217Clone name: TUS-33-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106582 [cLPP-2-K14] Trace: SGN-T173674 EST: SGN-E362814 Direction: 5' Facility: TIGR
Clone: SGN-C180217 [TUS-33-M15] Trace: SGN-T186432 EST: SGN-E373980 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373979Length: 657 bp (928 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373979 [] (trimmed) GAAACAGAGGGAGTAGTATTAAAGTTTAAATATATGTATGTACAACTTTCTTTTATGGCCTAAGTTTTTTTTTTCTTTTTATGCTCTCTTTACAA
TAATCCAAAATAAAGGGAGTAGGATAGAAACTTAAAACAAGATAACTGAAAAAAAAAATGTTAATTACTTTAGGCACATATACAGTGGTACACTA
GGCTTAGTTTTGTATCTGTAAAAGGCTGTTTTCTTCTTGTAAGTAGGATTATCAATAGTAATAACTATTCTCCCTTCTTCTCTAATATGAAAAGA
ATTCCTTACACTCTCCACCATTTTCTTATCTTCTTGAAGCATAACTCTGTACGAACAATCATCGTCTGGTATGAATTCTTCTCTGTAACTCACTT
CATTCCCCACCACTATCAAATCCCAAGTTATCGTCACCTCAACCTCTTTGACAGGCATTTTAATGAGGCAAAATGAACATGGTTTGATGCTTATC
TCAAGAACTTTGTCATCAGTTGAAAACTCAACATCCTTGTCCTTTTTGAGTCCACCATATTCAGCTAATAAGTTCTCTGGGCTAATATACTTGAG
AAGGGTCTCTGTAACTTTAGATGGCTTCACAAATATGAAGGCATTCTTGCTTCTTTGTGTGATCATTCGCAGATTAAGTGCATGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373979] SGN-U601450 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186431 [Download][View] Facility Assigned ID: FA0AAD21AG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0057 Quality Trim Threshold: 14.5