EST details — SGN-E369538

Search information 
Request: 369538Match: SGN-E369538
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176882Clone name: TUS-25-B16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176882 is on microarray TOM1 spot ID 1-1-1.2.8.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28097 [cLEF-46-I5] Trace: SGN-T61771 EST: SGN-E247360 Direction: 5' Facility: TIGR
Clone: SGN-C176882 [TUS-25-B16] Trace: SGN-T182028 EST: SGN-E369539 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E369538Length: 554 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369538 [] (trimmed) AACATTGGAAACTTCGACGTAGCCATTCATTAATAGCTCGTTGCCTACAACTTTTGAGGGTATCAAAAAATGTCCATCATTTAAATGCTTTTCTT
ACAGGAATTTGGGAAAACAAAAAACCAAAAAAAAAACAACATATTTTTTTTAAAAAGTTGTTATCAAGTTGAACCTGAAGTGGGTTTGTTTCACA
TAATAAGGGGCTGAGAGGATCGATAACATATTTTATTTACCCAGCAACTTTGGAAGTTTAAAAAATATTTCCCTTGATTTTAAAACTTTTAACGG
CGTCCCTAATTATTTGCTCCATTTAAATAAATTCCAGCCCCAAATCCATTAACTTTTTAGCTCCATCCTTGGCTTTTAAAAGCCCAGGTTGAGTT
TTTTTTGGCAACCTAGGAATGTTATATTCAGGGGAAAGCTTTGCAACCTTACCCGCGAAGTCTCCATAGTGAGTTATGGTTTCAACACACATGTG
CCTTCCTTTTGCTGATTTGTTTTCATTACCCAAAAAAATGAGCCAATGCCCCATTTTTGACATGGACTAATCCCATAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369538] SGN-U587936 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182027 [Download][View] Facility Assigned ID: FA0AAD13DA08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.903 Expected Error Rate: 0.0276 Quality Trim Threshold: 14.5