EST details — SGN-E369336

Search information 
Request: 369336Match: SGN-E369336
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177040Clone name: TUS-25-I6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177040 is on microarray TOM1 spot ID 1-1-3.1.8.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28885 [cLEF-49-I15] Trace: SGN-T62508 EST: SGN-E249000 Direction: 5' Facility: TIGR
Clone: SGN-C177040 [TUS-25-I6] Trace: SGN-T181827 EST: SGN-E369335 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369336Length: 726 bp (926 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369336 [] (trimmed) TTCGGTTGGTACCAATCCGTACACAACAGCTGGCCCGTATCTATGGAGGAATTTCGAATTTTCTCAAGATTCACGAGCAGAATTTTTCATCAAAA
GAAAGGACTTTTTTCAGATTGCCACTCCAAGTTTAAGAATTTTTAGAAGAGCCTTTTCTTCTTCGTCTGTTTCTAGCTTCTGAAGTTTCACTGTC
AAGCTGGTCGTTCCTAGTGGTTCCTCCATAAAAAGGCGTTGTATTGGATATTCACCAGAAGGCAACAATTTTGGGAGGATCAAAGTTAGAGGATT
ACCCAAAGGTGCAAAGCAGGTGGTATGTGATACTGGCAGAGGATGCAGTGGATATTGGGATCATCGGAGGAGGAGAAATCAATGGACAGGGATTG
AAGTTTGTAGAGAGATTTGATGACAAGAAGAATGTGATGGTAAGCTGGAACCATACTGGAGCTTGCCTTGGAGATGAGTGTAGGCCGAGGTTGGT
AGGGTTCATCGGCTGCCGAAATATTAAAGTCTCTGATGTTAGACTTATTGAACCTGCTTATTGGTGTTTGCATGTTGTACGAAGTGATAAGACAT
CAATCTGTGATGTAATCATATATGGGAACTTCAATTCACCCAACAACGATGGTATAGACATAGAGGATTCTAATAATACAGTTATCACTAGATGC
AACATCAACACAGGAGACGATGCTATCTGTCCCAAGTCATCAAATGGACCTGTCTACAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369336] SGN-U589095 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181828 [Download][View] Facility Assigned ID: FA0AAD13BE03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5