EST details — SGN-E369200

Search information 
Request: 369200Match: SGN-E369200
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176336Clone name: TUS-23-K22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176336 is on microarray TOM1 spot ID 1-1-3.3.10.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26493 [cLEF-40-J23] Trace: SGN-T60024 EST: SGN-E246172 Direction: 5' Facility: TIGR
Clone: SGN-C176336 [TUS-23-K22] Trace: SGN-T181239 EST: SGN-E369201 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369200Length: 641 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369200 [] (trimmed) ACAGAAAACTCCGCTATTTGTTACATTGATGTTGAAATTCTAATAAAGGTTAAATTACACTTGGTCCCAACATCTGCTACATTTACTAAATAGCA
CGAGTAGAGAATACGTAGATTAAACAAGTGTCACTGTGCACCCGAAGAAAACGAAAAAACGAAAAGCAAACTAGGAAGTATATTACAAGTTCTAA
AGAATCTATTCACAGGCCAATTTAGTGCCAAAACTGGTCAGGCAAATTGCAAACGCTTGGAAAGCAGACAAAGGCTTCCTGTAGTCCATTGTAAA
AACATCATCTCCTACTTTTCCAAACTGGAGGATAACTGTATCCTCGTCACCTTTTCCATCAGGTTGGATTTGGTCCATCGTTGCCACTAGCTGAA
AGATTGTTACAGATGCAACGGTGACCCTTCCATGGAAATTTAAACACCAACATTGCAAATGCTCATGCCATCTTGGAGCTTTGTTTTTTAGAACT
GTAGAGTTGGCTTTTGCGGAACCAACCAGCTTCTTCTTCAGAGCATCCTGAGATTTGTCCGAGGCAGCTTCTCCAGGACAGGGGCAATTGAGCGA
ACAAATCATCCTCCTTGGTCCTTTTGACTTTAGCAGGTTTAACCTGTAGGAAACACTTCCCACTTCAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369200] SGN-U598757 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181238 [Download][View] Facility Assigned ID: FA0AAD11BF11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0167 Quality Trim Threshold: 14.5