EST details — SGN-E362469
| Search information |
| Request: 362469 | Match: SGN-E362469 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C106014 | Clone name: cLPP-1-J1 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194242 [TUS-70-E24] | Trace: SGN-T347648 | EST: SGN-E546773 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C194242 [TUS-70-E24] | Trace: SGN-T350301 | EST: SGN-E549426 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362469 | Length: 600 bp (947 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362469 [] (trimmed)
TTTGACGATGTACATCTAGACATATACTATCTATCTCAACTCAATACTTTAGCTTACAAAATAATCATTTAAACAAAACATAACGGTGGAGATGA
GTTGAGATGTCTAGATATACAATCATAAAATTGAAGTATTATTTATTTGTTAATTATGATTAAATTTAAATATCTATGTATGTATTATGCGTTTT
CTTCGAAGTTATCAATAAATTCAATGCAAATGCAGGATGTCCATAATCAACGAATGTTTTTCCAAGGATACTGTCGAGGAGATATTGATGTCATT
TGAAGCTGAGGCACATAAATTAGGAAATGATTGGATTCAACCAGTGCTTAAACACCTAAAGATATTATCCCCAACGGGACTAAAAATAACACTAA
GATCGATTCGAGAAGGAAGGAAACAGACATTATCTGAGTGTTTGAAGAAAGAATTCAGAATCTCGAATAATATATTAAGGAGAACAATATCTAAT
GATTTCTACGAGGGCATAAGCGCTATTGTCATTAACAAGAATAACTCTCCCAAGTGGTGTCCTACAACTCTAGAGGAGGTGAAAGATGAGCAAGT
CAACTTGATTTTCAAAAATTTCGAACAACA
GTTGAGATGTCTAGATATACAATCATAAAATTGAAGTATTATTTATTTGTTAATTATGATTAAATTTAAATATCTATGTATGTATTATGCGTTTT
CTTCGAAGTTATCAATAAATTCAATGCAAATGCAGGATGTCCATAATCAACGAATGTTTTTCCAAGGATACTGTCGAGGAGATATTGATGTCATT
TGAAGCTGAGGCACATAAATTAGGAAATGATTGGATTCAACCAGTGCTTAAACACCTAAAGATATTATCCCCAACGGGACTAAAAATAACACTAA
GATCGATTCGAGAAGGAAGGAAACAGACATTATCTGAGTGTTTGAAGAAAGAATTCAGAATCTCGAATAATATATTAAGGAGAACAATATCTAAT
GATTTCTACGAGGGCATAAGCGCTATTGTCATTAACAAGAATAACTCTCCCAAGTGGTGTCCTACAACTCTAGAGGAGGTGAAAGATGAGCAAGT
CAACTTGATTTTCAAAAATTTCGAACAACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362469] | SGN-U583696 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T174530 [Download][View] | Facility Assigned ID: TPOAC49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
