EST details — SGN-E358318
| Search information |
| Request: 358318 | Match: SGN-E358318 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C102502 | Clone name: cLHT-28-E20 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194070 [TUS-69-N20] | Trace: SGN-T347352 | EST: SGN-E546477 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194070 [TUS-69-N20] | Trace: SGN-T347353 | EST: SGN-E546478 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E358318 | Length: 593 bp (862 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358318 [] (trimmed)
AGAACTAGTCTCGAGTTTTTTTTTTTTGGGTTTTGAGGTGAGAACTTGCATCAAATTTTATTCGTTTTTGCAGTGAAAAAAAAAATTAGTATCCA
CATCAGGAGAATGGAAGACTAGTCCCAGTTCCACGACATTCGTTATTATAATTAAACATCAATCCCACAAAGGTAGGATAAGGTCTACGTACACC
TTACTGTCCCCATACCAGACGAGGTATGTTGTTATTGTTGAGAAATTATAAACAAGACAAGGAAACGATAATCTGCTTTGGGAAGACAATTATAT
AGGGAGTATGAATTTGTCCAACAATTCATCATCAAGTGTAGTACTGTTCTTCTTCGTAACAAAAGTCCTCGTTAATTGGAGTAGCAAATTCAAGA
AGTTGCTTGTCATGCTCGAACACACTCATTTCTTGTTCATTCAAGTTAACAAAAGCTTCAATTCCTCCATCATATGTCCTCATCAAATAAATAAT
CTTGTTAACTGGACCCTTTGCAATGCTTGATCTAATAGGCTTCCCAAATCCAAAATCTAAATCTTGTAAAAATGGGAACTTACATAAGCTACTCG
AAATGTACAAATCACATTTCCTT
CATCAGGAGAATGGAAGACTAGTCCCAGTTCCACGACATTCGTTATTATAATTAAACATCAATCCCACAAAGGTAGGATAAGGTCTACGTACACC
TTACTGTCCCCATACCAGACGAGGTATGTTGTTATTGTTGAGAAATTATAAACAAGACAAGGAAACGATAATCTGCTTTGGGAAGACAATTATAT
AGGGAGTATGAATTTGTCCAACAATTCATCATCAAGTGTAGTACTGTTCTTCTTCGTAACAAAAGTCCTCGTTAATTGGAGTAGCAAATTCAAGA
AGTTGCTTGTCATGCTCGAACACACTCATTTCTTGTTCATTCAAGTTAACAAAAGCTTCAATTCCTCCATCATATGTCCTCATCAAATAAATAAT
CTTGTTAACTGGACCCTTTGCAATGCTTGATCTAATAGGCTTCCCAAATCCAAAATCTAAATCTTGTAAAAATGGGAACTTACATAAGCTACTCG
AAATGTACAAATCACATTTCCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E358318] | SGN-U574322 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T171576 [Download][View] | Facility Assigned ID: THTEF34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
