EST details — SGN-E344400
| Search information |
| Request: 344400 | Match: SGN-E344400 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C141064 | Clone name: cTOF-14-E19 |
| ||
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E344400 | Length: 776 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E344400 [] (trimmed)
GACTGCCTCTACTACTTCCCCATGAATTATCCCCCAAAATAGAATTGAAGTCCAAAATATGCCATTTGCTGCAGCATTAGCAGCACCATTGGCAC
CCCAAATCTCTTCACATAAAAAAGTGTGGGCTTCTTCCGGCACAATCAGGAAAAATAGCAATGCCCAGATGCAAAAATTGGAAAAGAATGCTCTT
CGGAATGTAACAGAGGTAGTTAGAAAGGATGCGGAGTTCATAAAAAAGGGAATTGGGAAGGGGCTGCAATGGGCGAACAAAACCTTTCGCATGCC
TAAACTCACTAAGTCACTTGATGATTTCATTTGGCTTCGTCATGTTGAGGAACCGGGGGTGTCTTCAGAGGTTTCCGATGCCCCCTCTTGGCCTC
AACCTCGTTACCCAGAACTATCTGGCATAGACTTGTTTATGGCTGATGTCGAAGCATTGGAGACATATCTTAATTATTTCTACTGCATATCTAAG
CGATGGACAAAGCCACTTCCTGAAACATATGATCCGGAACAAGTGTCAGAATATTTCAAGTTAAGACCCCATGTAGTGGCTCTTCGTCTGCTTGA
GGTATTTGTTGCCTTCACTTCTGCTGCAATCCAAATTAGAATATCTGGACTTCTCCCCACTTCAAATGAAGATGTCGTGAAGGAAACATCAAACT
ACATTCTTGGGGAAGGTTTTAAAGGAAACGATGCTAAACCTTGGTCCTACTTTTATCAAGATTGGTCAGTCTCTCTCAACAAGCCCGATATAATT
GGGTCTGAAATACAAA
CCCAAATCTCTTCACATAAAAAAGTGTGGGCTTCTTCCGGCACAATCAGGAAAAATAGCAATGCCCAGATGCAAAAATTGGAAAAGAATGCTCTT
CGGAATGTAACAGAGGTAGTTAGAAAGGATGCGGAGTTCATAAAAAAGGGAATTGGGAAGGGGCTGCAATGGGCGAACAAAACCTTTCGCATGCC
TAAACTCACTAAGTCACTTGATGATTTCATTTGGCTTCGTCATGTTGAGGAACCGGGGGTGTCTTCAGAGGTTTCCGATGCCCCCTCTTGGCCTC
AACCTCGTTACCCAGAACTATCTGGCATAGACTTGTTTATGGCTGATGTCGAAGCATTGGAGACATATCTTAATTATTTCTACTGCATATCTAAG
CGATGGACAAAGCCACTTCCTGAAACATATGATCCGGAACAAGTGTCAGAATATTTCAAGTTAAGACCCCATGTAGTGGCTCTTCGTCTGCTTGA
GGTATTTGTTGCCTTCACTTCTGCTGCAATCCAAATTAGAATATCTGGACTTCTCCCCACTTCAAATGAAGATGTCGTGAAGGAAACATCAAACT
ACATTCTTGGGGAAGGTTTTAAAGGAAACGATGCTAAACCTTGGTCCTACTTTTATCAAGATTGGTCAGTCTCTCTCAACAAGCCCGATATAATT
GGGTCTGAAATACAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E344400] | SGN-U565106 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T156378 [Download][View] | Facility Assigned ID: TOFCA34THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
