EST details — SGN-E340938

Search information 
Request: 340938Match: SGN-E340938
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C147565Clone name: cTOF-5-E16
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E340938Length: 539 bp (860 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E340938 [] (trimmed) GGCAATCACAGGCTGGTCCTGATGAGTCGCTGAAAGACGTGACCCTAACATTATTACAAAATAAGATATCTGCAGTTCCAGTTTTACATTCACCA
GAAGACGGGTCGTCTTTGCAGTTGTTGCATACTGCATGCCTTGCAGGAATATTAAAGCACATATACAGGCATTTTAGGCACTCTCTAGAGTATCT
GCCTATTGTACAGCAACCAGTGGGTAATCTTCCATTTGGCACCTGGACAAGAGAAGTTGGTGGAAGAGGAAGCAGCCGTGTATTGTTGACATTAC
ACAGTGGAGACCTCCTTAGTTCTGCTCTTAAATTACTAATAGAAGGTGAGATAAGTTCAATACCTATCGTTGATGATAATGGAGCCCTTATAAAT
GTGTATTCTCGGAGTGATATAACCTCTTTGGCAAGAGGCAGTGTGTATGCTCACTTTCGGCTTGACCAGATGATAATGACTCAAGTCCTGCAGGT
CTTAGATGAAGCATCCCGTGATCGTTGTAGGACATGCACACGCTTTGATCCACTGTACAGGATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E340938] SGN-U575347 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T153961 [Download][View] Facility Assigned ID: TOFAR32THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5