EST details — SGN-E340840

Search information 
Request: 340840Match: SGN-E340840
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C147790Clone name: cTOF-5-P5
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E340840Length: 693 bp (922 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E340840 [] (trimmed) GGTCGGAAACTGAGGTTGGGGATGCGCACCAGATTTCTGCTTATGTCTTGAAATGTTCGGAGGCCACATCATGTTGTAGTGTACGGATAGTTGCA
TGAAGTGTGATGATGGTAGCACTTGGGACAATATCTGTGAAACTGCCTTATCTATCTAGGTTTGTCTGTAATGTAAATGAAGATAGAATTAGTGA
GAAATAGTGGTCAAGTCATGAAACCTTTTTTGCTTTTCGTATAACAGCTAGTCGCCCTCTTCAATATTGATTTTAGGCTGCAGCATTTCCCTGTT
GATGGAACCATTCTCAATGATCTTGCTTACTTGGAATTATACGTCCAATTTTGTTGCTGGGAGCTGGAGACAAACCAGCGGAACTGCATGACATA
GAATGTGAATGGGTCATGCTCTCTGATGATCCTTGACGTTTAAAATAAGCTTTCCTGTTCCGTTGTTTGATCGAAATAACGTGATTGAAGGCTTA
ATTTCTTCTTCAAGTTTGTCATTTCAGCTATTTATTGACTAGGACTGCATTGCAGGATACTGCACATGCGAAGAAGTATTGGGAAAGAATTGNCT
TCTCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTACCTTTCTNCTGTAAAATCTTAAGTTCAAGATCATGATAGCACATGTATGATTATC
TAATTTTCACTTTTTTGTGGTCCTTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E340840] SGN-U603698 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T153863 [Download][View] Facility Assigned ID: TOFAS87THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5