EST details — SGN-E340656

Search information 
Request: 340656Match: SGN-E340656
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C142467Clone name: cTOF-1-D7
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E340656Length: 602 bp (876 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E340656 [] (trimmed) GATCAAATCTTTTAAAAGATAATCAACTTTTCTTTTCCGATATTTCAAAGAAATCAGTATGATAAGCGCCAAGAAACTCATCAAGATGGCAAGGA
AATGGCAAAAGTTTGCAGCTAAGCAGAGGAAGAGAATTTCTTTTCCAAGATCCAATTACTATGATGCTGAGAGTTGTAGCACATCATCTTCCATA
GTTGACAGAGGCCACTTTGTGGTGTATACAACCGATCAAAAGCGATTTGTGGTTCCATTGGCTTATCTTCAACATGACGTAATCAGACAACTGTT
GCACATGTCTGAAGAAGAGTTTGGACTTCCAAGTTATGGTCCTATTACATTACCATGTGATGCACTGTTCATGAACTATATCATATCACTCGTCA
AAAGAGGTGTAGCCGCTGATCTTCAGAATGCTTTGCTTGTTTCTGTACCTTCCAATCAATGTTCATCTGCTTCATACCTTCAAGAACGACGAAAT
CTAGAATTGTTAGTTTGTTAAGCTAACTGTAACAATTTTTATAGTAGATACATGGTACTAAACAAGTGTATATATAGAATGTCAATATTTATTAT
TCATCAAAATTACCATTTTCTTGAAAAANAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E340656] SGN-U585303 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T152787 [Download][View] Facility Assigned ID: TOFAC16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0034 Quality Trim Threshold: 12.5