EST details — SGN-E340068

Search information 
Request: 340068Match: SGN-E340068
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C147031Clone name: cTOF-3-H23
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E340068Length: 874 bp (untrimmed)
Status: Current VersionDirection: 5'
>SGN-E340068 [] (untrimmed)
AGCGGCCGCNNGTTATGTTTTTANNAANGAACCTTTGNNNNNNNNNNNNNNTTTGGTGGCGGCCGCTCTANAACTAGTGGATCCCCCGGGCTGCA
GGAATTCGGCACGAGGGTAGCCTGGATTTGGAGCCTTTCATGCTGGTTTTCATATTATAAGGGGAATGTTCTCTCCAGGGAAGGAAGATATATTG
TTACTTGTAACAAATGTTGATAACATGGAGACCTCTTCCTGCATGATTGCTCCACCAGAGACAAGTTTTCTTTTAAATGGAAACCGACTCGAGGG
GGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACC
CAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCT
GAATGGCGAATGGCAAATTGTAAGCGTTAATATTTTGTTAAAATTCGCGTTAAATTTTTGTTAAATCAGCTCATTTTTTAACCAATAGGCCGAAA
TCGGCAAAATCCCTTATAAATCAAAAGAATAGACCGAGATAGGGTTGAGTGTTGTTCCAGTTTGGAACAAGAGTCCACTATTAAAGAACGTGGAC
TCCAACGTCAAAGGGCGAAAAACCGTCTATCAGGGCGATGGCCCACTACGTGAACCATCACCCTAATCAAGTTTTTTGGGGTCGAGGTGCCGTAA
AGCACTAAATCGGAACCCTAAAGGGAGCCCCCGATTTAGAGCTTGACGGGGAAAGCCGGCGAACGTGGCGAGAAAGGAAGGGAAGAAAGCGAAAG
GAGCGGGCGCTAGGGCGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T153392 [Download][View] Facility Assigned ID: TOFAK48TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Problems: E. Coli (cloning host) sequence detected
Sequence Entropy: 0.941 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5