EST details — SGN-E311097
| Search information |
| Request: 311097 | Match: SGN-E311097 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99132 | Clone name: cLEZ-16-C14 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193490 [TUS-68-F16] | Trace: SGN-T346356 | EST: SGN-E545481 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193490 [TUS-68-F16] | Trace: SGN-T346357 | EST: SGN-E545482 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E311097 | Length: 526 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311097 [] (trimmed)
GAAATCGCATTGAGAGAAATTTTGGCGTCGAAATCGAGCATGAAAGGTTTGTACAATTCAGCAGAAGACCTTTGGACGCATCACAAAACCATCGA
AATCAAAATCCACCAAACCAAAAAATGCTGCAGCTATTGGTTCTAATGTTACTCAGCCTACACCACTCATCTCCCATGGCTCTCTCGATTTGAAA
GATAATTATGATCAGAATGAGGAAGTGTTGAGGCAATTCGACATGAATATGGTGTATGGGCCATGCCTTGGAATGAACAGACTGGACAGGTGGGA
GCGTGCCAAGAAACTCGGAATGAACCCTCCAGCAGACATGGAGCGCCTACTAAGGTCTAACAAAGTTCGCAATGAGTGCCTGCGGGATGGTCGCG
TTTAGCCCCCTTCTGCACTATTCCCATCTTTGGGTTTACATCTAGTTCCATGGCCTATCCGCTATCATTTTCTTCTTTTGGGGTCTTTGGGAAAG
GTATCATATGTCCAACAAGATGTACAGCAGCTGGCTGTACTATTAAGTATC
AATCAAAATCCACCAAACCAAAAAATGCTGCAGCTATTGGTTCTAATGTTACTCAGCCTACACCACTCATCTCCCATGGCTCTCTCGATTTGAAA
GATAATTATGATCAGAATGAGGAAGTGTTGAGGCAATTCGACATGAATATGGTGTATGGGCCATGCCTTGGAATGAACAGACTGGACAGGTGGGA
GCGTGCCAAGAAACTCGGAATGAACCCTCCAGCAGACATGGAGCGCCTACTAAGGTCTAACAAAGTTCGCAATGAGTGCCTGCGGGATGGTCGCG
TTTAGCCCCCTTCTGCACTATTCCCATCTTTGGGTTTACATCTAGTTCCATGGCCTATCCGCTATCATTTTCTTCTTTTGGGGTCTTTGGGAAAG
GTATCATATGTCCAACAAGATGTACAGCAGCTGGCTGTACTATTAAGTATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311097] | SGN-U572094 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T123099 [Download][View] | Facility Assigned ID: TRZCJ19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.992 | Expected Error Rate: 0.0302 | Quality Trim Threshold: 12.5 |
Working
