EST details — SGN-E310892

Search information 
Request: 310892Match: SGN-E310892
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C99454Clone name: cLEZ-17-K11
cartOrder Clone
Library Name: cLEZOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: germinating seedlings

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C193535 [TUS-68-H13] Trace: SGN-T346433 EST: SGN-E545558 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E310892Length: 536 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E310892 [] (trimmed) CTGTATTCAAAGTTTATACTATTTGATTGCTTAAGCAGAAAAAGAGCAGGGAAATTCTGATGAAGAATGGATGTTCCAATGTCTAGTGAAATGTT
TGAAGCTCAGGCTCATATCTACAAGCATGCCTTCAGTTTTGCAAATTCCATGGTTCTTGGTTGTGCAATTCAATTAGGCATACCTGATGTTATTC
ATAGTCATAAGCAGCCAATGACTCTGTCTCAGCTTGTTTCACACCTCAAACTTCCTCTTGAAAAATCAGATGCAATTCATCGATTGATGCGCCTA
TTGGTATACTCTGGATTCTTTGCTACTACAGACTTTCTTGATGAAAACTCAGAAAGTCAACAAGGGTATGTTCTTACACCTTCTTCTAAGCTGCT
TTTGAAGAGTGAGATCCCAAACTTGTCACCTTTTGCTAGAGCAATGATTGATCCTGTTATGGTGAATCCATGGCAATCTTTGGGGGATTGGTTTC
TAGGAAATGAAACCACCCCTTTTGAGACAGCACATGGTGCACCCATGTGGAAATTCTGTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E310892] SGN-U583335 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T123317 [Download][View] Facility Assigned ID: TRZCM66TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5