EST details — SGN-E309892
| Search information |
| Request: 309892 | Match: SGN-E309892 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C98596 | Clone name: cLEZ-10-M17 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193423 [TUS-68-C21] | Trace: SGN-T346241 | EST: SGN-E545366 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193423 [TUS-68-C21] | Trace: SGN-T350070 | EST: SGN-E549195 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E309892 | Length: 233 bp (1024 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E309892 [] (trimmed)
GCAAAAACCTCAACTTTCCTTCAAATTCTGCTCTATTTTCGATTCAGTGTTTTGGTTTTGGATTCAATTGCTGATAAAGATTTGTTTTTGAAAAT
GGTGTTAGTGTAAAGTGCTGCTGGAGTTTGATTTTGATTTGTTTGTTTGCGATGACGGGAACGGGAACAGGAACAGGAACAGGAATAGGAGGGGA
AGATGTTGATTACGAGAGCGATCCGGAGGAAGCCATGCTGTCG
GGTGTTAGTGTAAAGTGCTGCTGGAGTTTGATTTTGATTTGTTTGTTTGCGATGACGGGAACGGGAACAGGAACAGGAACAGGAATAGGAGGGGA
AGATGTTGATTACGAGAGCGATCCGGAGGAAGCCATGCTGTCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E309892] | SGN-U584435 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122562 [Download][View] | Facility Assigned ID: TRZBK81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.931 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
