EST details — SGN-E308074
| Search information |
| Request: 308074 | Match: SGN-E308074 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C96047 | Clone name: cLEY-14-F18 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192861 [TUS-66-L11] | Trace: SGN-T345275 | EST: SGN-E544400 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192861 [TUS-66-L11] | Trace: SGN-T345276 | EST: SGN-E544401 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308074 | Length: 571 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308074 [] (trimmed)
GAGCCTTTCCTAGAGCCCTGGGAAATCCAGCTAAGTATAAAAAGGCATGATGACAGTTCCCTTCTGAGTAGTGATGTGACTAGAAATCTTCATAT
CAAGTCGACAACTCAACTTAACTTGAATCTTACCGAGTCCCTTATTGAGGTTGTTTCTAGGACAATCGAGATGATAAAAAATGCAGGGGATCTGG
CGCAGATGGCTGCTCATTCTGAAATCCCTTCATTCTTAAATTCTCAGAGAAGTGAAAATCTGGATACCGGGAGTTCTCCTCCTTATATACTGCAG
AATTTGACTTCATTGCCTTTAGAGTTTCATGTCTATCAACAGCGGCAGAGTGGTTATGGCTTAGAAGTATCCTCCATGAAAAGTAGAAAGTATTT
ACAACCAGGATCTTCTATTCCAGTTTATGTTAGTGAAAGTCTTGAAGATCAAATTTTACGCTATAGTCCGGCCCAATCCTGGGAACAACTTGGTG
ACAAAAAATCGGTGGAGCCATCACATCATTATATCATTGTTCAACTTGAGGGAACATCACTTCCTTCGGTTCCTATTTCAATGGATCTTGTTGGA
C
CAAGTCGACAACTCAACTTAACTTGAATCTTACCGAGTCCCTTATTGAGGTTGTTTCTAGGACAATCGAGATGATAAAAAATGCAGGGGATCTGG
CGCAGATGGCTGCTCATTCTGAAATCCCTTCATTCTTAAATTCTCAGAGAAGTGAAAATCTGGATACCGGGAGTTCTCCTCCTTATATACTGCAG
AATTTGACTTCATTGCCTTTAGAGTTTCATGTCTATCAACAGCGGCAGAGTGGTTATGGCTTAGAAGTATCCTCCATGAAAAGTAGAAAGTATTT
ACAACCAGGATCTTCTATTCCAGTTTATGTTAGTGAAAGTCTTGAAGATCAAATTTTACGCTATAGTCCGGCCCAATCCTGGGAACAACTTGGTG
ACAAAAAATCGGTGGAGCCATCACATCATTATATCATTGTTCAACTTGAGGGAACATCACTTCCTTCGGTTCCTATTTCAATGGATCTTGTTGGA
C
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308074] | SGN-U597381 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119757 [Download][View] | Facility Assigned ID: TRYCD33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
