EST details — SGN-E306761
| Search information |
| Request: 306761 | Match: SGN-E306761 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97127 | Clone name: cLEY-19-P7 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193081 [TUS-67-E15] | Trace: SGN-T345653 | EST: SGN-E544778 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193081 [TUS-67-E15] | Trace: SGN-T345654 | EST: SGN-E544779 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306761 | Length: 660 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306761 [] (trimmed)
TTATGGTACTGGAGGCATTATTGGCTCCAGGGTCTGAATTGTGGATGTTTAATGAGGTGCCCGAGAAAGATAGAGAAAAAAAGTTGACTGATGGG
GGTCTTGATATATCAGGACTAGATAACATAAAACTTGTCCATCGTGTGGGAAATGCAGTGATTAGACGTCATTTAGAGGGTCTTCCTTTGGAGAC
ATTTGATTCGATGAATCCGTCGAAGACTCCATTGTTCACTCTGATTCACGCTCTCTTGCCACCCTCCTTCTCATCCGAGATATCCAGTCGAAGCG
TCTTCCTAATAAAGACTCTAGGTCTGTTTCTCTACGGCATTCAGTGTTTTCTCAGAGCTCCTGGATTCGTGAAATGGCCNAAGGCAGGCTTCAAC
AGATCAATAATAATAAGTGAGATATTGGACTCTAGGACAAGAAATCTTGTGTCAGTGTCTAGGATAAGTGATTACGTGCTGTCAAATGAACTGGT
GAGCATGGCACTTGCAATGGTAGCAGAAGACAAACAGATTAATCGTGTTCTAGAAGAACTGTTTGCGGAAGAGGGAAATGAATTATGCATCAAGC
CGGCAGAGTTTTATCTGTATGATCAGGAAGAAGTGTGCTTCTATGATATCATGAGAAGGGGTCGTCAAAGACGGGAGATAGTGATTGGAT
GGTCTTGATATATCAGGACTAGATAACATAAAACTTGTCCATCGTGTGGGAAATGCAGTGATTAGACGTCATTTAGAGGGTCTTCCTTTGGAGAC
ATTTGATTCGATGAATCCGTCGAAGACTCCATTGTTCACTCTGATTCACGCTCTCTTGCCACCCTCCTTCTCATCCGAGATATCCAGTCGAAGCG
TCTTCCTAATAAAGACTCTAGGTCTGTTTCTCTACGGCATTCAGTGTTTTCTCAGAGCTCCTGGATTCGTGAAATGGCCNAAGGCAGGCTTCAAC
AGATCAATAATAATAAGTGAGATATTGGACTCTAGGACAAGAAATCTTGTGTCAGTGTCTAGGATAAGTGATTACGTGCTGTCAAATGAACTGGT
GAGCATGGCACTTGCAATGGTAGCAGAAGACAAACAGATTAATCGTGTTCTAGAAGAACTGTTTGCGGAAGAGGGAAATGAATTATGCATCAAGC
CGGCAGAGTTTTATCTGTATGATCAGGAAGAAGTGTGCTTCTATGATATCATGAGAAGGGGTCGTCAAAGACGGGAGATAGTGATTGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306761] | SGN-U597043 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120608 [Download][View] | Facility Assigned ID: TRYCW88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 14.5 |
Working
