EST details — SGN-E306460
| Search information |
| Request: 306460 | Match: SGN-E306460 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93056 | Clone name: cLEX-13-I7 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192504 [TUS-65-M14] | Trace: SGN-T344662 | EST: SGN-E543787 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192504 [TUS-65-M14] | Trace: SGN-T344663 | EST: SGN-E543788 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306460 | Length: 520 bp (1080 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306460 [] (trimmed)
GAGAGAGACCCATTATTCAATGATGTACCAAGCTAGAACAAGGAAAAGGGTTTTTGGTATCCAAATACATCGTGGTCCTGATGGCAGTGCTTTTC
AAAAATGTGAAACATGTGGAGTCTCAGTGGCTATTGCGTTGGCTGACATGCATGAATGTGAACCCAGAAAAAATGTAAAGAAATTGAAATGCCAA
CCCAGGAGCAGAACCATTGTTAAGGGGAAGAGGCTTATTCACCAACCCAGATCGGCTTTTCGAATTTTCATGGAGGATTTTGTGAAGAAAAACAT
TGACGGAAATGAGTTTGAAGTTGATAACAGAGGTTTCGAGACGTGGAAAAACATGACACGTAAGGAGAAGATTTTGTACTTCATGAAAGCCGAGA
TAATTAATCTTGCACATGTGAAACTTTTGCACAAAGAGGAGAATGATATGCTATGGAGGGTGGATGACGAGGCAGATTCAGCTGATGTTGGCAAG
TATGATGAGAACTATGAAAACTATGATCATTATGATTCTGAATCT
AAAAATGTGAAACATGTGGAGTCTCAGTGGCTATTGCGTTGGCTGACATGCATGAATGTGAACCCAGAAAAAATGTAAAGAAATTGAAATGCCAA
CCCAGGAGCAGAACCATTGTTAAGGGGAAGAGGCTTATTCACCAACCCAGATCGGCTTTTCGAATTTTCATGGAGGATTTTGTGAAGAAAAACAT
TGACGGAAATGAGTTTGAAGTTGATAACAGAGGTTTCGAGACGTGGAAAAACATGACACGTAAGGAGAAGATTTTGTACTTCATGAAAGCCGAGA
TAATTAATCTTGCACATGTGAAACTTTTGCACAAAGAGGAGAATGATATGCTATGGAGGGTGGATGACGAGGCAGATTCAGCTGATGTTGGCAAG
TATGATGAGAACTATGAAAACTATGATCATTATGATTCTGAATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306460] | SGN-U572280 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T117553 [Download][View] | Facility Assigned ID: TRXBW52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
