EST details — SGN-E306318
| Search information |
| Request: 306318 | Match: SGN-E306318 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93011 | Clone name: cLEX-13-G6 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192497 [TUS-65-M7] | Trace: SGN-T344650 | EST: SGN-E543775 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192497 [TUS-65-M7] | Trace: SGN-T344651 | EST: SGN-E543776 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306318 | Length: 574 bp (940 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306318 [] (trimmed)
GCAAAGGTTTAGATGGATTGCTTCAGAAGGCACAAGAGATTCTAGATAGGACGCCAAACAGTCATTTTTTCGTCAGTTTGAGAATCCTGCCAATC
CAAAGGGATTGGGACTGGAGGCACGGTGACGGGAGCAGGAAGGTTCCTTAAGGAGAAGAATCCAGAAATAAAGGTATATGGTGTAGAACCAGCTG
AAAATGCGATTCTAAACGGAGGACAACTAGGGCCACATAAAATCCAAGGAATTGGTGCTAGTTTCATCCCAGCCGTCCTCGATCAAAGCATCCTG
GATGGAGTTCTTCAAGTATCTAGTAATGAAGCTATTGAAATGACAAAGGTTCTTGCATTGAAAGAAGGCCTACTGGTAGGAATATCATCAGGTGC
TGCAGCTGCTGCAGCAGTACAAGTAGCAAAAAAGCCCGAAAATGCTGGGAAACTTATCGCGGTCATCTTCCCTAGTTTCGGGGAGCGTTATCTTT
CCACTGTGCTGTTTGATTCTATTAGAGAAGAGGTGATGAACATGACTTTTGAGTAACTTTATGCTTCTTTAAACTGAGGGATACATGTTATTCCT
ATTT
CAAAGGGATTGGGACTGGAGGCACGGTGACGGGAGCAGGAAGGTTCCTTAAGGAGAAGAATCCAGAAATAAAGGTATATGGTGTAGAACCAGCTG
AAAATGCGATTCTAAACGGAGGACAACTAGGGCCACATAAAATCCAAGGAATTGGTGCTAGTTTCATCCCAGCCGTCCTCGATCAAAGCATCCTG
GATGGAGTTCTTCAAGTATCTAGTAATGAAGCTATTGAAATGACAAAGGTTCTTGCATTGAAAGAAGGCCTACTGGTAGGAATATCATCAGGTGC
TGCAGCTGCTGCAGCAGTACAAGTAGCAAAAAAGCCCGAAAATGCTGGGAAACTTATCGCGGTCATCTTCCCTAGTTTCGGGGAGCGTTATCTTT
CCACTGTGCTGTTTGATTCTATTAGAGAAGAGGTGATGAACATGACTTTTGAGTAACTTTATGCTTCTTTAAACTGAGGGATACATGTTATTCCT
ATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306318] | SGN-U592354 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T117411 [Download][View] | Facility Assigned ID: TRXBX39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0096 | Quality Trim Threshold: 12.5 |
Working
