EST details — SGN-E302904
| Search information |
| Request: 302904 | Match: SGN-E302904 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C91178 | Clone name: cLEW-26-E14 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
This clone has been mapped as P68.
| Additional sequencing |
| Clone: SGN-C191981 [TUS-64-G19] | Trace: SGN-T343764 | EST: SGN-E542889 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191981 [TUS-64-G19] | Trace: SGN-T343765 | EST: SGN-E542890 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E302904 | Length: 629 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E302904 [] (trimmed)
TTTTCGAGGAAGGAAAGTAGTATTAGAAAAGTCGGGGAGAAATCAATGCTCTTCATTTTTTTCCCCCTTTTTCTAAACTAGGGTTTCTATAACAA
CAACTATTTGTGTCTTCACTCTATTATAATTTAACTTATAAAGTTTTTTCTAATTTCTTTTTCTCTTCATCTTTCAGATCTAAGAAACCATAAAG
TTTTTATTTTTAGGGGTTATTATCCACTTCAAGATTTAGAATCTTTCTATTTTTGGAAACTTCTCATGAATTGGTGGAAAGAGGATATTTCTGAA
GGACGTCTAATACGTTAAGGGCATTTTTTCGCGAAGAAGAAAATGGTGAGGGGAATAACTGAGATGAAAAGGATTGAAAATACAACAAGTAGACA
AGTGACATTCTCAAAAAGAAGAGGTGGACTACTTAAGAAGGCATTTGAACTCTCAGTTCTTTGTGATGCTGAAGTTAGTCTCATCATATTTTCTC
AAAAAGGAAAACTTTTTGAGTTTTCAAGTTCAAGTACTAACAAGACAATAGAACGTTATCAAAAGAATGACAAGAATTTGGGTCATGAAAATATA
TTACTTGAACAAACTACAAAGCATTTGAAGGGGGAGGTTATGAGCATGACTAGGAATCT
CAACTATTTGTGTCTTCACTCTATTATAATTTAACTTATAAAGTTTTTTCTAATTTCTTTTTCTCTTCATCTTTCAGATCTAAGAAACCATAAAG
TTTTTATTTTTAGGGGTTATTATCCACTTCAAGATTTAGAATCTTTCTATTTTTGGAAACTTCTCATGAATTGGTGGAAAGAGGATATTTCTGAA
GGACGTCTAATACGTTAAGGGCATTTTTTCGCGAAGAAGAAAATGGTGAGGGGAATAACTGAGATGAAAAGGATTGAAAATACAACAAGTAGACA
AGTGACATTCTCAAAAAGAAGAGGTGGACTACTTAAGAAGGCATTTGAACTCTCAGTTCTTTGTGATGCTGAAGTTAGTCTCATCATATTTTCTC
AAAAAGGAAAACTTTTTGAGTTTTCAAGTTCAAGTACTAACAAGACAATAGAACGTTATCAAAAGAATGACAAGAATTTGGGTCATGAAAATATA
TTACTTGAACAAACTACAAAGCATTTGAAGGGGGAGGTTATGAGCATGACTAGGAATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E302904] | SGN-U572195 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T114736 [Download][View] | Facility Assigned ID: TRDDX31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.918 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 14.5 |
Working
