EST details — SGN-E301614

Search information 
Request: 301614Match: SGN-E301614
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90575Clone name: cLEW-23-C9
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191833 [TUS-64-A15] Trace: SGN-T343510 EST: SGN-E542635 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E301614Length: 586 bp (916 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E301614 [] (trimmed) GGCAAGATGGAATGAAAGTATCAAAAGATATGGACCGTTTAATGGCATATTACAAAGGTCTAACTACTTGGGCTAGATGGGTTGATGGAAATGTT
GACTCCTCTAAGACCAAAGTGTTCTTCCAGGGCATTTCTCCAACTCATTATATGTAAGTGCTACACTTCTTCATTTGCTCAATAATTGCTCGAAT
TTAAGTTTTATATACTGAAAGTTCGAGAACTATTCATATGATCAACTAACTCAAAAGTATGTAACGGTATAACCTATGCTTGCTCGGGCTCTTGA
AAAATGAGCCGGGTCCAAAAGAAACACATAGCTTTTAGAAGATTCAGTACACAACAGTTCTTTTGATGAGTCTGAGCAACATAGTAGGTAACCTA
GAGAAAGTAGCAACCAACGTGCAATCATAGTGCGCGTATAACTAACCACTAACTTTCACTGAATATATATGTTTTCCACGCGTAAGAAGCTCAAA
ATTCATGTTCTGTTGTATCTTGATCAGGGGTCAGGAATGGGGGGCAGCAACAAAGAATTGCAACTCAGAGCAAATACCATTAGCAGGATCGACAT
ATCCAGCAAGGACACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E301614] SGN-U571213 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114251 [Download][View] Facility Assigned ID: TRDDK17TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5