EST details — SGN-E300709

Search information 
Request: 300709Match: SGN-E300709
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C91924Clone name: cLEW-8-O9
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191464 [TUS-63-B6] Trace: SGN-T342870 EST: SGN-E541995 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191464 [TUS-63-B6] Trace: SGN-T342872 EST: SGN-E541997 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E300709Length: 528 bp (1017 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E300709 [] (trimmed) GCAAAACCGATAAGTTCAGTGTGAGACAAGAAGAGCGAAACATGGCCTGAGCGACGGTGAACTCTATCCCGGCGACCGGCGTTAACGCCGGAGTT
GGCAGAGGAGCCAATATGACTGGCGCGTCATACGTAAATTCGTTTCGAATCTCCGCCGTAGCTGACCGATTAGCAAAGCATGTGTGTAATCAGCC
CAAAATTGACCCTCAGGAGTTCGTTCACCTCTGCCTATCACTTGCAAGAGGCATTGATTTTGCCATTGCAAACCGGGAGGTTCCAAATAGAGCTC
AAGATTTACCTTTATTGGTGAAACAGGTATGCAGAATCCCCTGTGATACATTACTGCTAGCACATGTCATGGTCCTTATGATTTCTGTCAAGAAT
GCTTGTCATAGAGGGTGGGTTACAGAGAAAGATGCCAAGGAACTTTGTGATCTTGCCAATGAGATATACAGCAGCTTCTGCACCACATTAGATTT
TAACACTGAACCAAGCAATTCTTCGACAATTATCTCGACGATGATGTCTAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300709] SGN-U566923 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112314 [Download][View] Facility Assigned ID: TRDBC89TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0300 Quality Trim Threshold: 14.5