EST details — SGN-E300318

Search information 
Request: 300318Match: SGN-E300318
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C89545Clone name: cLEW-17-M2
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E300318Length: 637 bp (842 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E300318 [] (trimmed) GACAAAATTATGTTTTGGGGTTTTGTTTTGTTTTGTGTGTTGGGTACAAGAGGAGGATTGACACAAGATGTTGGTGCTCTTATTAGTAAAGACAT
ATTTGAGAGAATGCTATTGCATCGTAATGATGCCAATTGTAATGCCAAAGGATTTTACACTTATGATGCTTTTATAACAGCTGCAAGGTCCTTTG
CTGCTTTTGGAACTACTGGAAACACCAACACTCGTAAGAAGGAAATCGCTGCATTTTTGGCACAAACTTCTCTTGAAACAACCGGGGGGTGGGGA
ACAGCTCCGGATGGTCCATTTTCATGGGGATATTGCTTCAAGCAAGAACAAGGTAGCCCACCAGATTACTGTGTTGCAAATCAACAGTGGCCTTG
TGCTCCTGGTAAAAAATACTTTGGTCGAGGTCCCATCCAAATATCCTACAACTACAACTATGGACCAGCAGGAAGAGCCATAGGAGTTGATTTGT
TAAACAATCCAGATGCTGTTGCAAATGATGCAGTCGTTTCATTCAAGACAGCCTTGTGGTTCTGGATGACGGCCCAGAGACCAAAGCCATCGGCC
CATTTTGTTATTACTGGTAAATGGAGACCAACAGGAGCTGATTTGTCTGCTGGTCGTGTCTCTGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300318] SGN-U584901 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113366 [Download][View] Facility Assigned ID: TRDCN73TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0112 Quality Trim Threshold: 14.5