EST details — SGN-E299233
| Search information |
| Request: 299233 | Match: SGN-E299233 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C86681 | Clone name: cLET-43-O5 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191278 [TUS-62-J12] | Trace: SGN-T342550 | EST: SGN-E541675 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191278 [TUS-62-J12] | Trace: SGN-T342553 | EST: SGN-E541678 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E299233 | Length: 625 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E299233 [] (trimmed)
CATTCATGTTACAGTATCCATGCTCTACTCGGATCATTCCGACGTCGTTTTTGCTCCCTGCTCAGTGGCCTCAGCCTCACAGCGACGAGCTCCTC
CTTGCTATGGAGGAATCTGATTTCGAAGAAAAGTGTAATGAAATCAGAAAAATGAACAGCAACTTAGTTGTAATTGGGAAGACTAACATAGATAA
TGATAAAGAAGACTTTGACAATGAAGCAGAGGATGATGATGCAGACAATGGCGATGAATCAGAGGGTGATGACTTTGAGCAGGAAACTGGTTGAC
AATGCCTTGTTTGGTTTCTTATATCCGTATGTGTAGTGTATATGGTTCTAAAATTGCTGGAATTTATGTATTGCTTTGAACTTCAAGTGTTTTGT
ACAGCCAAGGAGAGATGATTGGCATTTCCCTAACAGAAATGGGAAGAAGCTTCATGCTTTCTGGCAGAAGAATCATATATTATGTTTGATTATGT
TATTTGTGTGATACAAAATTTCGACTTCTACATTAATTTGAATCTATTCATATGCAGTTCGATACTATTTAATCTGCTGACTGCCAGAAAGCATG
AAGGCGATTCACGATTAAAAATGTAGAGCTTGAAAACACTGAATAATGCCTGATG
CTTGCTATGGAGGAATCTGATTTCGAAGAAAAGTGTAATGAAATCAGAAAAATGAACAGCAACTTAGTTGTAATTGGGAAGACTAACATAGATAA
TGATAAAGAAGACTTTGACAATGAAGCAGAGGATGATGATGCAGACAATGGCGATGAATCAGAGGGTGATGACTTTGAGCAGGAAACTGGTTGAC
AATGCCTTGTTTGGTTTCTTATATCCGTATGTGTAGTGTATATGGTTCTAAAATTGCTGGAATTTATGTATTGCTTTGAACTTCAAGTGTTTTGT
ACAGCCAAGGAGAGATGATTGGCATTTCCCTAACAGAAATGGGAAGAAGCTTCATGCTTTCTGGCAGAAGAATCATATATTATGTTTGATTATGT
TATTTGTGTGATACAAAATTTCGACTTCTACATTAATTTGAATCTATTCATATGCAGTTCGATACTATTTAATCTGCTGACTGCCAGAAAGCATG
AAGGCGATTCACGATTAAAAATGTAGAGCTTGAAAACACTGAATAATGCCTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E299233] | SGN-U583741 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T110974 [Download][View] | Facility Assigned ID: TMEGM87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0170 | Quality Trim Threshold: 12.5 |
Working
