EST details — SGN-E298184
| Search information |
| Request: 298184 | Match: SGN-E298184 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C91981 | Clone name: cLEW-9-E7 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191482 [TUS-63-B24] | Trace: SGN-T342901 | EST: SGN-E542026 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191482 [TUS-63-B24] | Trace: SGN-T342903 | EST: SGN-E542028 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E298184 | Length: 530 bp (965 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E298184 [] (trimmed)
GGATAGTTTTAGGACGGAGTTATTGTCTCCCGCTGCTCAATCGGTTGTTGATCACTCCATGTCGTTAGGGTCGACATGGAAACTCAACACGAGTG
ACTTCCATCTTCCTCAACACCGCTCTTATGATCATCATTCTTTCAATTTCCTTCATCTACTTCGCGCTTTCAGTAATACCTCCTCACTTCCCTTT
TCAAATACTACATGCATTTTGATCAATATACTTTGTTTGGTTGAATATGAAATTTAAAAATACTGCACACTTTGATATATATCAAAGTACCACTC
TTACACAAATTTTGTTAAATATATTGTGACATGTTATTAAGAGAGAAACTATTAATTGTTATGACTTGTGTTATATTTTCTTCATATGTAAATCT
TATATTTGAATTCATAGTAAAAATTAGATAATTTGACTCAATCATCTCACATAAAATGCCTGTTGAGCGTTATTATATTTATGTTCTACCTGCTC
TTTGTGTTGACAATTAAATTAATTTATTGATAGTTGCATTTCTAAAGTATATCCT
ACTTCCATCTTCCTCAACACCGCTCTTATGATCATCATTCTTTCAATTTCCTTCATCTACTTCGCGCTTTCAGTAATACCTCCTCACTTCCCTTT
TCAAATACTACATGCATTTTGATCAATATACTTTGTTTGGTTGAATATGAAATTTAAAAATACTGCACACTTTGATATATATCAAAGTACCACTC
TTACACAAATTTTGTTAAATATATTGTGACATGTTATTAAGAGAGAAACTATTAATTGTTATGACTTGTGTTATATTTTCTTCATATGTAAATCT
TATATTTGAATTCATAGTAAAAATTAGATAATTTGACTCAATCATCTCACATAAAATGCCTGTTGAGCGTTATTATATTTATGTTCTACCTGCTC
TTTGTGTTGACAATTAAATTAATTTATTGATAGTTGCATTTCTAAAGTATATCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E298184] | SGN-U602293 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T112666 [Download][View] | Facility Assigned ID: TRDBG28TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.939 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |
Working
